RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 IGSF3O75054 1194 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 CELF2O95319 508 aaKnown RBP9.4□□□□□ -0.9
CCDC65-203ENST00000547861 IL1R1P14778 569 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 LIG1P18858 919 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 ECE1P42892 770 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 SEC23AQ15436 765 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 TBC1D16Q8TBP0 767 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 ESR2Q92731 530 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 PGBD1Q96JS3 809 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 CD209Q9NNX6 404 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 ATP8A2Q9NTI2 1148 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 ARPP21Q9UBL0 812 aaPredicted RBP9.4□□□□□ -0.9
CCDC65-203ENST00000547861 CNOT7Q9UIV1 285 aaKnown RBP9.4□□□□□ -0.9
CCDC65-203ENST00000547861 SLC12A7Q9Y666 1083 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
CCDC65-203ENST00000547861 ERICH2A1L162 156 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 KIF28PB7ZC32 967 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 USP17L21D6R901 530 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 AOC2O75106 756 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 FGRP09769 529 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 CYP2D6P10635 497 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 PCP11498 1178 aaKnown RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 RCAN1P53805 252 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 DIXDC1Q155Q3 683 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 CPLX2Q6PUV4 134 aaKnown RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 RGS22Q8NE09 1264 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 PHKBQ93100 1093 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ZNF396Q96N95 335 aaPredicted RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 AIFM3Q96NN9 605 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 USP28Q96RU2 1077 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 UBAC1Q9BSL1 405 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 DBNDD1Q9H9R9 158 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 GJB4Q9NTQ9 266 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 POLLQ9UGP5 575 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 PGAP2Q9UHJ9 254 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 CFAP45Q9UL16 551 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 H7C1D1 291 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 PSMD14O00487 310 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ORC4O43929 436 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 PRDM1O75626 825 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 GSTO1P78417 241 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 RTN1Q16799 776 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ATL3Q6DD88 541 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 SYNE3Q6ZMZ3 975 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ENAHQ8N8S7 591 aaPredicted RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 SH3RF3Q8TEJ3 882 aaPredicted RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ALG1Q9BT22 464 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 KCNQ5Q9NR82 932 aa9.39□□□□□ -0.91
CCDC65-203ENST00000547861 POLR2AP24928 1970 aaKnown RBP9.39□□□□□ -0.91
CCDC65-203ENST00000547861 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
CCDC65-203ENST00000547861 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
CCDC65-203ENST00000547861 IFNAR1P17181 557 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 CEBPZQ03701 1054 aaKnown RBP9.38□□□□□ -0.91
CCDC65-203ENST00000547861 BRAPQ7Z569 592 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 SAPCD2Q86UD0 394 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 BICD2Q8TD16 824 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 ZSCAN10Q96SZ4 725 aaPredicted RBP9.38□□□□□ -0.91
CCDC65-203ENST00000547861 FUCA2Q9BTY2 467 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 SLC26A6Q9BXS9 759 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 RCOR1Q9UKL0 485 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 THSD7BQ9C0I4 1608 aa9.38□□□□□ -0.91
CCDC65-203ENST00000547861 FAM205AQ6ZU69 1335 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 UBE2Q2LH0YL09 131 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 ECE2O60344 883 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 SSRP1Q08945 709 aaKnown RBP9.37□□□□□ -0.91
CCDC65-203ENST00000547861 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 TBC1D10BQ4KMP7 808 aaPredicted RBP9.37□□□□□ -0.91
CCDC65-203ENST00000547861 MYSM1Q5VVJ2 828 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 KRT40Q6A162 431 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 DLK2Q6UY11 383 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 TMTC2Q8N394 836 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 DPF2Q92785 391 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 NUP62CLQ9H1M0 184 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 DDX19AQ9NUU7 478 aaKnown RBP9.37□□□□□ -0.91
CCDC65-203ENST00000547861 TSKSQ9UJT2 592 aa9.37□□□□□ -0.91
CCDC65-203ENST00000547861 LDHCP07864 332 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 SLC3A2P08195 630 aaKnown RBP9.36□□□□□ -0.91
CCDC65-203ENST00000547861 MAP2K2P36507 400 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 BTDP43251 543 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 USP5P45974 858 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 PPP4CP60510 307 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
CCDC65-203ENST00000547861 NBPF11Q86T75 865 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 IQCA1Q86XH1 822 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 RNF214Q8ND24 703 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 NUP133Q8WUM0 1156 aa9.36□□□□□ -0.91
CCDC65-203ENST00000547861 PPP1R9BQ96SB3 815 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms