RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GNRH1P01148 92 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 FGRP09769 529 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 HAND2P61296 217 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 SPICE1Q8N0Z3 855 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 LPAR1Q92633 364 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 DSCC1Q9BVC3 393 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 NYAP2Q9P242 653 aa22.23■■□□□ 1.15
PRPF40B-206ENST00000547764 ORC4O43929 436 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 PEX10O60683 326 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 FCGRTP55899 365 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 POTEEQ6S8J3 1075 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 RUFY2Q8WXA3 655 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 CEP95Q96GE4 821 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 TXNRD2Q9NNW7 524 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 MTMR4Q9NYA4 1195 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 RBPJLQ9UBG7 517 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 MORF4L1Q9UBU8 362 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 RAD50Q92878 1312 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 PLIN4Q96Q06 1357 aa22.22■■□□□ 1.15
PRPF40B-206ENST00000547764 NBPF3Q9H094 633 aa22.21■■□□□ 1.15
PRPF40B-206ENST00000547764 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
PRPF40B-206ENST00000547764 CLIP2Q9UDT6 1046 aa22.21■■□□□ 1.15
PRPF40B-206ENST00000547764 TSPY2A6NKD2 308 aa22.2■■□□□ 1.14
PRPF40B-206ENST00000547764 CCDC85CA6NKD9 419 aa22.2■■□□□ 1.14
PRPF40B-206ENST00000547764 RANBP6O60518 1105 aaKnown RBP22.2■■□□□ 1.14
PRPF40B-206ENST00000547764 GTF3C2Q8WUA4 911 aaPredicted RBP22.2■■□□□ 1.14
PRPF40B-206ENST00000547764 TANGO6Q9C0B7 1094 aa22.2■■□□□ 1.14
PRPF40B-206ENST00000547764 ZNF213O14771 459 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 WDR46O15213 610 aaKnown RBP22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 RAD21O60216 631 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 TTLL1O95922 423 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 HOXD10P28358 340 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 BMP2KLQ5H9B9 411 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 AKNAD1Q5T1N1 836 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 TBC1D10CQ8IV04 446 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 GPRC5AQ8NFJ5 357 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 MKL1Q969V6 931 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 SRRDQ9UH36 339 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 PTCH2Q9Y6C5 1203 aa22.19■■□□□ 1.14
PRPF40B-206ENST00000547764 SPDYE16A6NNV3 312 aaPredicted RBP22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 SGSM2O43147 1006 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 PRMT2P55345 433 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 COG2Q14746 738 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 Q3C1V9 767 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 RRP12Q5JTH9 1297 aaKnown RBP22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 LBX2Q6XYB7 198 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 MFSD6Q6ZSS7 791 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 STAG1Q8WVM7 1258 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 PAGR1Q9BTK6 254 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 IL17RBQ9NRM6 502 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 CTNNA3Q9UI47 895 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 HTTP42858 3142 aa22.18■■□□□ 1.14
PRPF40B-206ENST00000547764 MGAMO43451 1857 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 F5H6K3 240 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 TNPO2O14787 897 aaKnown RBP22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 NMT2O60551 498 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 CNMDO75829 334 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 PCP11498 1178 aaKnown RBP22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 ERVK-9P63128 1117 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 ERVK-24P63145 666 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 KLRC3Q07444 240 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 PPP4R2Q9NY27 417 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 HOXC10Q9NYD6 342 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 RABGAP1Q9Y3P9 1069 aa22.17■■□□□ 1.14
PRPF40B-206ENST00000547764 MYPNQ86TC9 1320 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 FLOT1O75955 427 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 PTH1RQ03431 593 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 PRKCZQ05513 592 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 IMMTQ16891 758 aaKnown RBP22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 FAM83BQ5T0W9 1011 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 LRRC47Q8N1G4 583 aaKnown RBP22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 RNF41Q9H4P4 317 aaPredicted RBP22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 SYNPO2Q9UMS6 1093 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 GABRQQ9UN88 632 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 MYH4Q9Y623 1939 aa22.16■■□□□ 1.14
PRPF40B-206ENST00000547764 NDUFB10O96000 172 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 DSG3P32926 999 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 PPP4R3BQ5MIZ7 849 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 NKX2-3Q8TAU0 364 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 COA7Q96BR5 231 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 BTBD7Q9P203 1132 aa22.15■■□□□ 1.14
PRPF40B-206ENST00000547764 RLFQ13129 1914 aa22.14■■□□□ 1.14
PRPF40B-206ENST00000547764 NEDD4P46934 1319 aa22.14■■□□□ 1.14
PRPF40B-206ENST00000547764 NUP88Q99567 741 aaPredicted RBP22.14■■□□□ 1.13
PRPF40B-206ENST00000547764 STX8Q9UNK0 236 aa22.14■■□□□ 1.13
PRPF40B-206ENST00000547764 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 DOCK3Q8IZD9 2030 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 NOVP48745 357 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 FLT3LGP49771 235 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 GMCL1P1Q8NEA9 526 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 RAET1EQ8TD07 263 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 ATG4CQ96DT6 458 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 PORCNQ9H237 461 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 TCP11L1Q9NUJ3 509 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 FBXO28Q9NVF7 368 aa22.13■■□□□ 1.13
PRPF40B-206ENST00000547764 SLC9C1Q4G0N8 1177 aa22.12■■□□□ 1.13
PRPF40B-206ENST00000547764 ESR2Q92731 530 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms