RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 SEPT2Q15019 361 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNB3-206ENST00000547693 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.46
CACNB3-206ENST00000547693 ZNF112Q9UJU3 913 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
CACNB3-206ENST00000547693 HPS5Q9UPZ3 1129 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 NID2Q14112 1375 aa12.15□□□□□ -0.46
CACNB3-206ENST00000547693 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 PHF20L1A8MW92 1017 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
CACNB3-206ENST00000547693 IFNAR1P17181 557 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 GJB2P29033 226 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 ADD1P35611 737 aaKnown RBP12.14□□□□□ -0.47
CACNB3-206ENST00000547693 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 CCDC144CPQ8IYA2 1237 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
CACNB3-206ENST00000547693 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 PRDM10Q9NQV6 1147 aa12.14□□□□□ -0.47
CACNB3-206ENST00000547693 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-206ENST00000547693 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-206ENST00000547693 GRM4Q14833 912 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 GPATCH4Q5T3I0 446 aaKnown RBP12.13□□□□□ -0.47
CACNB3-206ENST00000547693 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
CACNB3-206ENST00000547693 RAB11FIP4Q86YS3 637 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 SCYL3Q8IZE3 742 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 RGS22Q8NE09 1264 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
CACNB3-206ENST00000547693 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 WRNIP1Q96S55 665 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 CSADQ9Y600 493 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 MYH4Q9Y623 1939 aa12.13□□□□□ -0.47
CACNB3-206ENST00000547693 PTPDC1A2A3K4 754 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 XBP1P17861 261 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 RXRAP19793 462 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 CDC27P30260 824 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
CACNB3-206ENST00000547693 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 GMCL1P1Q8NEA9 526 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 RNF26Q9BY78 433 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-206ENST00000547693 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-206ENST00000547693 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
CACNB3-206ENST00000547693 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 GREB1LQ9C091 1923 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 PALM3A6NDB9 673 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 KLRF2D3W0D1 207 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 F5H6K3 240 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 H3BQV1 296 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 PRPF3O43395 683 aaKnown RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 RAD21O60216 631 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 DEXIO95424 95 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 FMNL1O95466 1100 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 SLC1A4P43007 532 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 USP14P54578 494 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 KLRC3Q07444 240 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 TRIM29Q14134 588 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 LRRC47Q8N1G4 583 aaKnown RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 FEZ1Q99689 392 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 WDR18Q9BV38 432 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 SLC26A6Q9BXS9 759 aa12.11□□□□□ -0.47
CACNB3-206ENST00000547693 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 FAM217BQ9NTX9 383 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-206ENST00000547693 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 SNHG28P0DPA3 235 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 PDHBP11177 359 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 INPP5BP32019 993 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 FKBP1BP68106 108 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 ST3GAL1Q11201 340 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 PRKG1Q13976 671 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 NTRK3Q16288 839 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 MAP1SQ66K74 1059 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-206ENST00000547693 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
CACNB3-206ENST00000547693 LPAR1Q92633 364 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms