RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 RNASE9P60153 205 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 ZC3H12AQ5D1E8 599 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 SMIM24O75264 130 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 PPP1R37O75864 691 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 NR1D1P20393 614 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 TRAF1Q13077 416 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 CPLX4Q7Z7G2 160 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 TBC1D1Q86TI0 1168 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 MAN1B1Q9UKM7 699 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 HGSO14964 777 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 KCNQ3O43525 872 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 MFAP3LO75121 409 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 ANP32DO95626 131 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 PECAM1P16284 738 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 RPS6KA3P51812 740 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 ERVK-24P63145 666 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 NR1I3Q14994 352 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 SPATS2Q86XZ4 545 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 STAMQ92783 540 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 ATP6V0A4Q9HBG4 840 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 PDE2AO00408 941 aaPredicted RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 DIAPH2O60879 1101 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 NOD2Q9HC29 1040 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 COL15A1P39059 1388 aa13.34□□□□□ -0.27
RBFOX1-208ENST00000547372 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.27
RBFOX1-208ENST00000547372 ABCC6O95255 1503 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 DBNDD2Q9BQY9 259 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 NAA15Q9BXJ9 866 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 EHD2Q9NZN4 543 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 SERTAD1Q9UHV2 236 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 TIMM10P62072 90 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 CKAP4Q07065 602 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 TFCP2Q12800 502 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 TMTC1Q8IUR5 882 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 EEF2KMTQ96G04 330 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 TMOD1P28289 359 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 PTGISQ16647 500 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 BZW1Q7L1Q6 419 aaKnown RBP13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 MAPK8IP1Q9UQF2 711 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 DUSP10Q9Y6W6 482 aa13.33□□□□□ -0.28
RBFOX1-208ENST00000547372 RNF225M0QZC1 329 aaPredicted RBP13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 POSTNQ15063 836 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 CYFIP2Q96F07 1278 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 GYPCP04921 128 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC39A14Q15043 492 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 SUCLG2Q96I99 432 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 TAB2Q9NYJ8 693 aa13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
RBFOX1-208ENST00000547372 PRC1O43663 620 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 CYP27A1Q02318 531 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 TTC5Q8N0Z6 440 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 JCADQ9P266 1359 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 ZNF213O14771 459 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 AMPD2Q01433 879 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC30A9Q6PML9 568 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 TRIM74Q86UV6 250 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 TRIM73Q86UV7 250 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 KCNV2Q8TDN2 545 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 NFU1Q9UMS0 254 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 ZNF18P17022 549 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 SCTRP47872 440 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 FAM133BQ5BKY9 247 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 PHKBQ93100 1093 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 SLC26A6Q9BXS9 759 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 ZNHIT6Q9NWK9 470 aaKnown RBP13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
RBFOX1-208ENST00000547372 A0A087WZG4 1122 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 IARSP41252 1262 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 TTC39AQ5SRH9 613 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 HVCN1Q96D96 273 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 STK38LQ9Y2H1 464 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 AGLP35573 1532 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 PHF20L1A8MW92 1017 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 MDH1P40925 334 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 HOMEZQ8IX15 550 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 CACNA2D3Q8IZS8 1091 aa13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 ENOX1Q8TC92 643 aaKnown RBP13.3□□□□□ -0.28
RBFOX1-208ENST00000547372 NUP58Q9BVL2 599 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms