RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PRMT2P55345 433 aa13□□□□□ -0.33
GCN1-202ENST00000547263 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
GCN1-202ENST00000547263 CEP95Q96GE4 821 aa13□□□□□ -0.33
GCN1-202ENST00000547263 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
GCN1-202ENST00000547263 TRIM47Q96LD4 638 aa13□□□□□ -0.33
GCN1-202ENST00000547263 P2RX7Q99572 595 aaKnown RBP13□□□□□ -0.33
GCN1-202ENST00000547263 FEZ1Q99689 392 aa13□□□□□ -0.33
GCN1-202ENST00000547263 SH2D4AQ9H788 454 aa13□□□□□ -0.33
GCN1-202ENST00000547263 EFCC1Q9HA90 598 aa13□□□□□ -0.33
GCN1-202ENST00000547263 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
GCN1-202ENST00000547263 TXNRD2Q9NNW7 524 aa13□□□□□ -0.33
GCN1-202ENST00000547263 TCP11L1Q9NUJ3 509 aa13□□□□□ -0.33
GCN1-202ENST00000547263 RBPJLQ9UBG7 517 aa13□□□□□ -0.33
GCN1-202ENST00000547263 ADAMTS5Q9UNA0 930 aa13□□□□□ -0.33
GCN1-202ENST00000547263 HTTP42858 3142 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
GCN1-202ENST00000547263 WDR46O15213 610 aaKnown RBP12.99□□□□□ -0.33
GCN1-202ENST00000547263 PRDM1O75626 825 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 CNMDO75829 334 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 SKAP1Q86WV1 359 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 TBC1D10CQ8IV04 446 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 ZNF444Q8N0Y2 327 aaPredicted RBP12.99□□□□□ -0.33
GCN1-202ENST00000547263 NKX2-3Q8TAU0 364 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 COL11A1P12107 1806 aaPredicted RBP12.99□□□□□ -0.33
GCN1-202ENST00000547263 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
GCN1-202ENST00000547263 IRX3P78415 501 aaPredicted RBP12.98□□□□□ -0.33
GCN1-202ENST00000547263 ARHGEF6Q15052 776 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 AKNAD1Q5T1N1 836 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 ANKRD13CQ8N6S4 541 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 GMCL1P1Q8NEA9 526 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 SMCR8Q8TEV9 937 aaPredicted RBP12.98□□□□□ -0.33
GCN1-202ENST00000547263 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 ARMC5Q96C12 935 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 RPAP3Q9H6T3 665 aaPredicted RBP12.98□□□□□ -0.33
GCN1-202ENST00000547263 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 SRRDQ9UH36 339 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 RABGAP1Q9Y3P9 1069 aa12.98□□□□□ -0.33
GCN1-202ENST00000547263 TTLL1O95922 423 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 NEFLP07196 543 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 PSMC4P43686 418 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 TFAP4Q01664 338 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 IRF5Q13568 498 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 ZYXQ15942 572 aaKnown RBP12.97□□□□□ -0.33
GCN1-202ENST00000547263 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
GCN1-202ENST00000547263 F5H6K3 240 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 TSPY3P0CV98 308 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 TSPY8P0CW00 308 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 DSG3P32926 999 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 FCGRTP55899 365 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 ERVK-9P63128 1117 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 ERVK-24P63145 666 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 PTH1RQ03431 593 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 KLRC3Q07444 240 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 COG2Q14746 738 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 KIF22Q14807 665 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 Q3C1V9 767 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 FAM47AQ5JRC9 791 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 PPP4R3BQ5MIZ7 849 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 RCSD1Q6JBY9 416 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 REPS2Q8NFH8 660 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 RNF41Q9H4P4 317 aaPredicted RBP12.96□□□□□ -0.33
GCN1-202ENST00000547263 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 CTNNA3Q9UI47 895 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 GJD2Q9UKL4 321 aa12.96□□□□□ -0.33
GCN1-202ENST00000547263 NEDD4P46934 1319 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 ZNF213O14771 459 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 PLA2G6O60733 806 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 NDUFB10O96000 172 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 HAND2P61296 217 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 GPRC5AQ8NFJ5 357 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 USP6NLQ92738 828 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 GMCL1Q96IK5 515 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 ESYT1Q9BSJ8 1104 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
GCN1-202ENST00000547263 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 IGHA2P01877 340 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 HOXD10P28358 340 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 RGS19P49795 217 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 PRKCZQ05513 592 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 MFSD6Q6ZSS7 791 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 MB21D1Q8N884 522 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 TTC14Q96N46 770 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 LSG1Q9H089 658 aaKnown RBP12.94□□□□□ -0.34
GCN1-202ENST00000547263 PORCNQ9H237 461 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 PPP1R9AQ9ULJ8 1098 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
GCN1-202ENST00000547263 ATP2A1O14983 1001 aa12.93□□□□□ -0.34
GCN1-202ENST00000547263 NMT2O60551 498 aa12.93□□□□□ -0.34
GCN1-202ENST00000547263 PEX10O60683 326 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms