RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
PFDN5-205ENST00000547228 EPHX3Q9H6B9 360 aa7.14□□□□□ -1.27
PFDN5-205ENST00000547228 SLC28A3Q9HAS3 691 aa7.14□□□□□ -1.27
PFDN5-205ENST00000547228 SALL1Q9NSC2 1324 aa7.14□□□□□ -1.27
PFDN5-205ENST00000547228 GINM1Q9NU53 330 aa7.14□□□□□ -1.27
PFDN5-205ENST00000547228 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.14□□□□□ -1.27
PFDN5-205ENST00000547228 HERC5Q9UII4 1024 aaKnown RBP7.14□□□□□ -1.27
PFDN5-205ENST00000547228 DDX60LQ5H9U9 1706 aaKnown RBP7.13□□□□□ -1.27
PFDN5-205ENST00000547228 LDHCP07864 332 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 FGFR2P21802 821 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 MRE11P49959 708 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 EPHB4P54760 987 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 PPIGQ13427 754 aaKnown RBP eCLIP7.13□□□□□ -1.27
PFDN5-205ENST00000547228 SLC4A10Q6U841 1118 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 RNF180Q86T96 592 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 PARP9Q8IXQ6 854 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 SLC44A5Q8NCS7 719 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 TOX2Q96NM4 488 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 NECAB3Q96P71 396 aaPredicted RBP7.13□□□□□ -1.27
PFDN5-205ENST00000547228 TRIM34Q9BYJ4 488 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 PBX4Q9BYU1 374 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 MTIF3Q9H2K0 278 aaKnown RBP7.13□□□□□ -1.27
PFDN5-205ENST00000547228 DHX36Q9H2U1 1008 aaKnown RBP7.13□□□□□ -1.27
PFDN5-205ENST00000547228 FLRT1Q9NZU1 646 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 PI4KBQ9UBF8 816 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 COG6Q9Y2V7 657 aa7.13□□□□□ -1.27
PFDN5-205ENST00000547228 GAKO14976 1311 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L15C9J2P7 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L13C9JLJ4 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L11C9JVI0 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L18D6R9N7 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L22D6RA61 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L17D6RBQ6 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L19D6RCP7 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L20D6RJB6 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 SMIM22K7EJ46 135 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 ERC2O15083 957 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 PEX10O60683 326 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 PQBP1O60828 265 aaKnown RBP7.12□□□□□ -1.27
PFDN5-205ENST00000547228 TIMP1P01033 207 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 SLURP2P0DP57 97 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 CYBAP13498 195 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 ITGB8P26012 769 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 BTDP43251 543 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 GSTO1P78417 241 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L24Q0WX57 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 LRRC41Q15345 812 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 OLFML2BQ68BL8 750 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 GIMAP6Q6P9H5 292 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 USP17L2Q6R6M4 530 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 ZNF662Q6ZS27 426 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
PFDN5-205ENST00000547228 CNPY4Q8N129 248 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 TMEM199Q8N511 208 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 NUP133Q8WUM0 1156 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 PBXIP1Q96AQ6 731 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 SUCLG2Q96I99 432 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 DDX4Q9NQI0 724 aaKnown RBP7.12□□□□□ -1.27
PFDN5-205ENST00000547228 CEP126Q9P2H0 1117 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 ABCF2Q9UG63 623 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 COG5Q9UP83 839 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 EYSQ5T1H1 3165 aa7.12□□□□□ -1.27
PFDN5-205ENST00000547228 GPR75-ASB3A0A0A6YYF3 556 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 FAM196BA6NMK8 535 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 RAB11FIP3O75154 756 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 RARBP10826 455 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 ADGRE1Q14246 886 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 GRB14Q14449 540 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 RABL6Q3YEC7 729 aaPredicted RBP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 MFSD5Q6N075 450 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 ANKRD33Q7Z3H0 272 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 MICALL1Q8N3F8 863 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 CRACR2BQ8N4Y2 399 aaPredicted RBP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 CALR3Q96L12 384 aaKnown RBP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 NOL10Q9BSC4 688 aaKnown RBP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 BICC1Q9H694 974 aaKnown RBP7.11□□□□□ -1.27
PFDN5-205ENST00000547228 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
PFDN5-205ENST00000547228 MROH7Q68CQ1 1323 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 CARNS1A5YM72 827 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 PRR33A8MZF0 331 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 PI4K2BG5E9Z4 385 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 EYA2O00167 538 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 VAMP4O75379 141 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 NBPF7P0C2Y1 421 aaPredicted RBP7.1□□□□□ -1.27
PFDN5-205ENST00000547228 MCCP23508 829 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 PBX2P40425 430 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 KCNQ1P51787 676 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 USP14P54578 494 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 TFF2Q03403 129 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 SF3A1Q15459 793 aaKnown RBP7.1□□□□□ -1.27
PFDN5-205ENST00000547228 CSPP1Q1MSJ5 1256 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 PSRC1Q6PGN9 363 aaPredicted RBP7.1□□□□□ -1.27
PFDN5-205ENST00000547228 ATF7IPQ6VMQ6 1270 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 TRPV1Q8NER1 839 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 NPLOC4Q8TAT6 608 aa7.1□□□□□ -1.27
PFDN5-205ENST00000547228 KAZALD1Q96I82 304 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms