RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 FLOT1O75955 427 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 SLC3A2P08195 630 aaKnown RBP12.78□□□□□ -0.36
LINC00661-202ENST00000547102 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
LINC00661-202ENST00000547102 COG2Q14746 738 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 STK11IPQ8N1F8 1099 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 EVI5LQ96CN4 794 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 SHISA4Q96DD7 197 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 PORCNQ9H237 461 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
LINC00661-202ENST00000547102 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 PATL2C9JE40 543 aaKnown RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 RAD21O60216 631 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 FARP2O94887 1054 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 XRCC5P13010 732 aaKnown RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 CAPN2P17655 700 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 PDE1AP54750 535 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 Q3C1V9 767 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 MB21D1Q8N884 522 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 DEFB118Q96PH6 123 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 APBA2Q99767 749 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 NAPBQ9H115 298 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 EPB41L4AQ9HCS5 686 aaPredicted RBP12.77□□□□□ -0.37
LINC00661-202ENST00000547102 STAP2Q9UGK3 403 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
LINC00661-202ENST00000547102 BRCA2P51587 3418 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 CNMDO75829 334 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 SGPL1O95470 568 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 TFRCP02786 760 aaKnown RBP12.76□□□□□ -0.37
LINC00661-202ENST00000547102 PDE4BQ07343 736 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 SAMD1Q6SPF0 538 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-202ENST00000547102 IFNL3Q8IZI9 196 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 TRIB2Q92519 343 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
LINC00661-202ENST00000547102 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 HMX1Q9NP08 348 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-202ENST00000547102 PAK6Q9NQU5 681 aaPredicted RBP12.76□□□□□ -0.37
LINC00661-202ENST00000547102 A0A0G2JMZ2 1700 aa12.76□□□□□ -0.37
LINC00661-202ENST00000547102 SLC15A5A6NIM6 579 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
LINC00661-202ENST00000547102 RASA1P20936 1047 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 MAP2K5Q13163 448 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 PLS1Q14651 629 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 MORN1Q5T089 497 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 B4GALNT3Q6L9W6 998 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 SMC5Q8IY18 1101 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-202ENST00000547102 RPTORQ8N122 1335 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 HTATIP2Q9BUP3 242 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
LINC00661-202ENST00000547102 BTBD7Q9P203 1132 aa12.75□□□□□ -0.37
LINC00661-202ENST00000547102 DSG3P32926 999 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 SIAH1Q8IUQ4 282 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 DPF3Q92784 378 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 SPATC1LQ9H0A9 340 aa12.74□□□□□ -0.37
LINC00661-202ENST00000547102 RLFQ13129 1914 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 PRDM1O75626 825 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 PTPREP23469 700 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 PPARAQ07869 468 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 TRIM32Q13049 653 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 GRB14Q14449 540 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 MFSD14CQ5VZR4 134 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 CHD1LQ86WJ1 897 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 USP6NLQ92738 828 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 ATG4CQ96DT6 458 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 MOV10L1Q9BXT6 1211 aaKnown RBP12.73□□□□□ -0.37
LINC00661-202ENST00000547102 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 HELLSQ9NRZ9 838 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 NYAP2Q9P242 653 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 PARP14Q460N5 1801 aa12.73□□□□□ -0.37
LINC00661-202ENST00000547102 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 ZNF236Q9UL36 1845 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 STRNO43815 780 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 ERCC3P19447 782 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 CCL14Q16627 93 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 FAM83BQ5T0W9 1011 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 DPP9Q86TI2 863 aa12.72□□□□□ -0.37
LINC00661-202ENST00000547102 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms