RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 VCAM1P19320 739 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 GOPCQ9HD26 462 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 TOMM22Q9NS69 142 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
DDX54-203ENST00000546869 MYH8P13535 1937 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 GCLCP48506 637 aaPredicted RBP17.09■□□□□ 0.33
DDX54-203ENST00000546869 DGKZQ13574 1117 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 GTF3C2Q8WUA4 911 aaPredicted RBP17.09■□□□□ 0.33
DDX54-203ENST00000546869 ASCC2Q9H1I8 757 aaPredicted RBP17.09■□□□□ 0.33
DDX54-203ENST00000546869 TSKSQ9UJT2 592 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 NEDD4P46934 1319 aa17.09■□□□□ 0.33
DDX54-203ENST00000546869 F5H6K3 240 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 WDR46O15213 610 aaKnown RBP17.08■□□□□ 0.32
DDX54-203ENST00000546869 FKTNO75072 461 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 REC8O95072 547 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 CYP2C8P10632 490 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 KLRC3Q07444 240 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 TRDNQ13061 729 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 ZYXQ15942 572 aaKnown RBP17.08■□□□□ 0.32
DDX54-203ENST00000546869 TSGA10IPQ3SY00 556 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 RRP12Q5JTH9 1297 aaKnown RBP17.08■□□□□ 0.32
DDX54-203ENST00000546869 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.32
DDX54-203ENST00000546869 ANKS1AQ92625 1134 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
DDX54-203ENST00000546869 E7EWF7 191 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 KDM4AO75164 1064 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 BCRP11274 1271 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
DDX54-203ENST00000546869 ATP2B2Q01814 1243 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 SP3Q02447 781 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 KIAA1755Q5JYT7 1200 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 RNF20Q5VTR2 975 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
DDX54-203ENST00000546869 RPAP3Q9H6T3 665 aaPredicted RBP17.07■□□□□ 0.32
DDX54-203ENST00000546869 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
DDX54-203ENST00000546869 MYPNQ86TC9 1320 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 SLC27A2O14975 620 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
DDX54-203ENST00000546869 COG2Q14746 738 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 CREB3L3Q68CJ9 461 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 SMCR8Q8TEV9 937 aaPredicted RBP17.06■□□□□ 0.32
DDX54-203ENST00000546869 KCNB2Q92953 911 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 MTA3Q9BTC8 594 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
DDX54-203ENST00000546869 B4E1Z4 1266 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 NMT2O60551 498 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
DDX54-203ENST00000546869 HERVK_113P62684 666 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 FAM110CQ1W6H9 321 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 ERO1AQ96HE7 468 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 GMCL1Q96IK5 515 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
DDX54-203ENST00000546869 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
DDX54-203ENST00000546869 NDUFB10O96000 172 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 ARHGEF6Q15052 776 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 SPICE1Q8N0Z3 855 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 TMEM47Q9BQJ4 181 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 CPA4Q9UI42 421 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 ADAMTS5Q9UNA0 930 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
DDX54-203ENST00000546869 PLA2G6O60733 806 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 GNRH1P01148 92 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 ZKSCAN1P17029 563 aaPredicted RBP17.03■□□□□ 0.32
DDX54-203ENST00000546869 DSG3P32926 999 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 HSPA4P34932 840 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 LACTBP83111 547 aaPredicted RBP17.03■□□□□ 0.32
DDX54-203ENST00000546869 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 RALYLQ86SE5 291 aaKnown RBP17.03■□□□□ 0.32
DDX54-203ENST00000546869 RBPJLQ9UBG7 517 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 RABGAP1Q9Y3P9 1069 aa17.03■□□□□ 0.32
DDX54-203ENST00000546869 SPDYE16A6NNV3 312 aaPredicted RBP17.02■□□□□ 0.32
DDX54-203ENST00000546869 KRT32Q14532 448 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 KIF22Q14807 665 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 POTEEQ6S8J3 1075 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 MB21D2Q8IYB1 491 aaPredicted RBP17.02■□□□□ 0.32
DDX54-203ENST00000546869 LRRC47Q8N1G4 583 aaKnown RBP17.02■□□□□ 0.32
DDX54-203ENST00000546869 MB21D1Q8N884 522 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 UBAC1Q9BSL1 405 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 TANGO6Q9C0B7 1094 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
DDX54-203ENST00000546869 FLOT1O75955 427 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 SNHG28P0DPA3 235 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 BMP3P12645 472 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 SEC23AQ15436 765 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 FAM83BQ5T0W9 1011 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 CYB5R4Q7L1T6 521 aa17.01■□□□□ 0.31
DDX54-203ENST00000546869 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms