RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 IFNL1Q8IU54 200 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
TROAP-204ENST00000546776 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 NAP1L2Q9ULW6 460 aaPredicted RBP13.14□□□□□ -0.31
TROAP-204ENST00000546776 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 SNCAIPQ9Y6H5 919 aa13.14□□□□□ -0.31
TROAP-204ENST00000546776 KLF18A0A0U1RQI7 1052 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 TTLL1O95922 423 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 CALM1P0DP23 149 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 CALM2P0DP24 149 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 CALM3P0DP25 149 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 CETPP11597 493 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 INPP5BP32019 993 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 EVCP57679 992 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 SEC23AQ15436 765 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 COL13A1Q5TAT6 717 aaPredicted RBP13.13□□□□□ -0.31
TROAP-204ENST00000546776 NOL8Q76FK4 1167 aaKnown RBP13.13□□□□□ -0.31
TROAP-204ENST00000546776 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
TROAP-204ENST00000546776 CEP95Q96GE4 821 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 SH2D4AQ9H788 454 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 LY9Q9HBG7 655 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 ARHGEF10LQ9HCE6 1279 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 MTMR4Q9NYA4 1195 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 ZBTB21Q9ULJ3 1066 aa13.13□□□□□ -0.31
TROAP-204ENST00000546776 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 TESPA1A2RU30 521 aaPredicted RBP13.12□□□□□ -0.31
TROAP-204ENST00000546776 ZBTB43O43298 467 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 NMT2O60551 498 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
TROAP-204ENST00000546776 GJA5P36382 358 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 RCAN1P53805 252 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 ICA1Q05084 483 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 APOBRQ0VD83 1088 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
TROAP-204ENST00000546776 CCL15Q16663 113 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 TNS4Q8IZW8 715 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 TBC1D2Q9BYX2 928 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 NYAP2Q9P242 653 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
TROAP-204ENST00000546776 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 DHX16O60231 1041 aaKnown RBP13.11□□□□□ -0.31
TROAP-204ENST00000546776 DDAH1O94760 285 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
TROAP-204ENST00000546776 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 NOVP48745 357 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 SEPT2Q15019 361 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
TROAP-204ENST00000546776 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
TROAP-204ENST00000546776 AS3MTQ9HBK9 375 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 CLIP2Q9UDT6 1046 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
TROAP-204ENST00000546776 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 CXCL11O14625 94 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 IRF6O14896 467 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 METAP2P50579 478 aaKnown RBP eCLIP13.1□□□□□ -0.31
TROAP-204ENST00000546776 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 RCSD1Q6JBY9 416 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 PNMA1Q8ND90 353 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 TMX3Q96JJ7 454 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 TMEM47Q9BQJ4 181 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 ZCCHC17Q9NP64 241 aaKnown RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
TROAP-204ENST00000546776 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
TROAP-204ENST00000546776 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 GOLGA8AA7E2F4 631 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 USP17L5A8MUK1 530 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 EEF2P13639 858 aaKnown RBP13.09□□□□□ -0.31
TROAP-204ENST00000546776 PTPRAP18433 802 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 PDIA3P30101 505 aaKnown RBP13.09□□□□□ -0.31
TROAP-204ENST00000546776 KIF5BP33176 963 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 RRP1BQ14684 758 aaKnown RBP13.09□□□□□ -0.31
TROAP-204ENST00000546776 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
TROAP-204ENST00000546776 MICU3Q86XE3 530 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 NUP133Q8WUM0 1156 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 BRI3BPQ8WY22 251 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 MKL1Q969V6 931 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
TROAP-204ENST00000546776 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
TROAP-204ENST00000546776 LARP6Q9BRS8 491 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms