RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 FUCA2Q9BTY2 467 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 CLSTN2Q9H4D0 955 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 FZD1Q9UP38 647 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 PNOCQ13519 176 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 C7orf43Q8WVR3 580 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
CCDC38-202ENST00000546386 EPSTI1Q96J88 318 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 NUP88Q99567 741 aaPredicted RBP13.78□□□□□ -0.2
CCDC38-202ENST00000546386 VEZTQ9HBM0 779 aa13.78□□□□□ -0.2
CCDC38-202ENST00000546386 PDS5AQ29RF7 1337 aaKnown RBP13.77□□□□□ -0.2
CCDC38-202ENST00000546386 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
CCDC38-202ENST00000546386 ZNF202O95125 648 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 ADCY5O95622 1261 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 EGFRP00533 1210 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 PTMAP06454 111 aaKnown RBP13.77□□□□□ -0.21
CCDC38-202ENST00000546386 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 U2AF2P26368 475 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC38-202ENST00000546386 JAG1P78504 1218 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 SH3BP5LQ7L8J4 393 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 PSMD14O00487 310 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 SLC39A14Q15043 492 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 PTPAQ15257 358 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
CCDC38-202ENST00000546386 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 COA7Q96BR5 231 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 BCS1LQ9Y276 419 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
CCDC38-202ENST00000546386 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 BRAPQ7Z569 592 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
CCDC38-202ENST00000546386 ENGASEQ8NFI3 743 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 CNKSR1Q969H4 720 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 GJA10Q969M2 543 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 PIGSQ96S52 555 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 CBX8Q9HC52 389 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 GAKO14976 1311 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 NPY5RQ15761 445 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 CFAP100Q494V2 611 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 PODNQ7Z5L7 613 aa13.76□□□□□ -0.21
CCDC38-202ENST00000546386 SCG2P13521 617 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 ZNF165P49910 485 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 RNF26Q9BY78 433 aaPredicted RBP13.75□□□□□ -0.21
CCDC38-202ENST00000546386 OSBPL5Q9H0X9 879 aaPredicted RBP13.75□□□□□ -0.21
CCDC38-202ENST00000546386 TTC12Q9H892 705 aaPredicted RBP13.75□□□□□ -0.21
CCDC38-202ENST00000546386 VWA3AA6NCI4 1184 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
CCDC38-202ENST00000546386 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
CCDC38-202ENST00000546386 PRPF3O43395 683 aaKnown RBP13.74□□□□□ -0.21
CCDC38-202ENST00000546386 SHMT1P34896 483 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 RRP1BQ14684 758 aaKnown RBP13.74□□□□□ -0.21
CCDC38-202ENST00000546386 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 PHF20Q9BVI0 1012 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 TMEM260Q9NX78 707 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 PP2D1A8MPX8 630 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 KRT2P35908 639 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 SYKP43405 635 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 AFMP43652 599 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 INF2Q27J81 1249 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 STYK1Q6J9G0 422 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 FBXO41Q8TF61 875 aa13.74□□□□□ -0.21
CCDC38-202ENST00000546386 DDX19AQ9NUU7 478 aaKnown RBP13.74□□□□□ -0.21
CCDC38-202ENST00000546386 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
CCDC38-202ENST00000546386 SNED1Q8TER0 1413 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 ASTN2O75129 1339 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-202ENST00000546386 PLCG2P16885 1265 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 SEPT2Q15019 361 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 NBPF9Q3BBW0 867 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 DLK2Q6UY11 383 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 WASF1Q92558 559 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 A0A087X0B3 334 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 DDAH1O94760 285 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 KIAA2012Q0VF49 1180 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 PTGDRQ13258 359 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 DGKZQ13574 1117 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 STRIP1Q5VSL9 837 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 FOXP4Q8IVH2 680 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-202ENST00000546386 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
CCDC38-202ENST00000546386 TMEM39BQ9GZU3 492 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 MTMR4Q9NYA4 1195 aa13.73□□□□□ -0.21
CCDC38-202ENST00000546386 TNS1Q9HBL0 1735 aaKnown RBP13.72□□□□□ -0.21
CCDC38-202ENST00000546386 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
CCDC38-202ENST00000546386 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms