RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ARID5BQ14865 1188 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 APOA5Q6Q788 366 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 BCAS4Q8TDM0 211 aa13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
NPC1L1-204ENST00000546276 SPOPO43791 374 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 PLA2G4DQ86XP0 818 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 FAM204AQ9H8W3 233 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 SAP30BPQ9UHR5 308 aaKnown RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 ADCY10Q96PN6 1610 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 PNMA6AP0CW24 399 aaPredicted RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 ERCC3P19447 782 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 DAAM2Q86T65 1068 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 SYCE1Q8N0S2 351 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 PARD6BQ9BYG5 372 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 PHKG2P15735 406 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 FOXP1Q9H334 677 aaPredicted RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 METP08581 1390 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 RPN1P04843 607 aaKnown RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 RBL2Q08999 1139 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 CALCRLQ16602 461 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 PEX26Q7Z412 305 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 UBL4BQ8N7F7 174 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 RRP15Q9Y3B9 282 aaKnown RBP13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 TNKSO95271 1327 aa13.57□□□□□ -0.24
NPC1L1-204ENST00000546276 ATP11AP98196 1134 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 ENOX1Q8TC92 643 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 SMC6Q96SB8 1091 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 CSRNP2Q9H175 543 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 TET3O43151 1660 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 CIAO1O76071 339 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 SASH1O94885 1247 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 DDB1Q16531 1140 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 PTPN21Q16825 1174 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 TTLL7Q6ZT98 887 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 BLIDQ8IZY5 108 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 MAN1B1Q9UKM7 699 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 MED14O60244 1454 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 NEO1Q92859 1461 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 ADCY7P51828 1080 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 CLNS1AP54105 237 aaKnown RBP13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 CTSWP56202 376 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 PGBD1Q96JS3 809 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 M0R2C6 588 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 PLS1Q14651 629 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
NPC1L1-204ENST00000546276 USP6P35125 1406 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 BUB1BO60566 1050 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 CEP85LQ5SZL2 805 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 TAOK1Q7L7X3 1001 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 FAN1Q9Y2M0 1017 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 LIG3P49916 1009 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 PTGDRQ13258 359 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 PLCB1Q9NQ66 1216 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 STIM2Q9P246 746 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 TFAP4Q01664 338 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 CLUL1Q15846 466 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 PNMA8AQ86V59 439 aaPredicted RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 FERMT1Q9BQL6 677 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 IMPG2Q9BZV3 1241 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 GNA14O95837 355 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 ATP1A3P13637 1013 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 CTNNA1P35221 906 aaKnown RBP13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 MAP2K2P36507 400 aa13.55□□□□□ -0.24
NPC1L1-204ENST00000546276 ATP1A2P50993 1020 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 APBA1Q02410 837 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 PPARDQ03181 441 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 ARHGAP31Q2M1Z3 1444 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 SCG2P13521 617 aa13.54□□□□□ -0.24
NPC1L1-204ENST00000546276 ADORA1P30542 326 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms