RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FGAP02671 866 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 FGRP09769 529 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 HSPD1P10809 573 aaKnown RBP14.13□□□□□ -0.15
YBX3-217ENST00000546164 ZYXQ15942 572 aaKnown RBP14.13□□□□□ -0.15
YBX3-217ENST00000546164 LBX2Q6XYB7 198 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 CENPQQ7L2Z9 268 aaPredicted RBP14.13□□□□□ -0.15
YBX3-217ENST00000546164 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 ZNF444Q8N0Y2 327 aaPredicted RBP14.13□□□□□ -0.15
YBX3-217ENST00000546164 ARMC5Q96C12 935 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
YBX3-217ENST00000546164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
YBX3-217ENST00000546164 EEF2P13639 858 aaKnown RBP14.12□□□□□ -0.15
YBX3-217ENST00000546164 RPAP3Q9H6T3 665 aaPredicted RBP14.12□□□□□ -0.15
YBX3-217ENST00000546164 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
YBX3-217ENST00000546164 RBPJLQ9UBG7 517 aa14.12□□□□□ -0.15
YBX3-217ENST00000546164 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
YBX3-217ENST00000546164 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
YBX3-217ENST00000546164 WDR46O15213 610 aaKnown RBP14.11□□□□□ -0.15
YBX3-217ENST00000546164 PRDM1O75626 825 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 POTEEQ6S8J3 1075 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 CWC27Q6UX04 472 aaKnown RBP14.11□□□□□ -0.15
YBX3-217ENST00000546164 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 GPRC5AQ8NFJ5 357 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 TXNRD2Q9NNW7 524 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 RABGAP1Q9Y3P9 1069 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 MYPNQ86TC9 1320 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 ZSWIM8A7E2V4 1837 aa14.11□□□□□ -0.15
YBX3-217ENST00000546164 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
YBX3-217ENST00000546164 TNPO2O14787 897 aaKnown RBP14.1□□□□□ -0.15
YBX3-217ENST00000546164 ORC4O43929 436 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 RGS19P49795 217 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 ERVK-9P63128 1117 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 ERVK-24P63145 666 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 PRKCZQ05513 592 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 MKL1Q969V6 931 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 GOPCQ9HD26 462 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 MTMR4Q9NYA4 1195 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 RAD50Q92878 1312 aa14.1□□□□□ -0.15
YBX3-217ENST00000546164 TSPY3P0CV98 308 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 TSPY8P0CW00 308 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 PCP11498 1178 aaKnown RBP14.09□□□□□ -0.15
YBX3-217ENST00000546164 ATP2B2Q01814 1243 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 IRF5Q13568 498 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 COG2Q14746 738 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 SLC9C1Q4G0N8 1177 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 PPP4R3BQ5MIZ7 849 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 COA7Q96BR5 231 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 CEP95Q96GE4 821 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 ZNF333Q96JL9 665 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
YBX3-217ENST00000546164 CNMDO75829 334 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 ECM2O94769 699 aaPredicted RBP14.08□□□□□ -0.16
YBX3-217ENST00000546164 TTLL1O95922 423 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 MAPK4P31152 587 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 FLT3LGP49771 235 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 NT5C2P49902 561 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 TFAP4Q01664 338 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 Q3C1V9 767 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 SPICE1Q8N0Z3 855 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 RAET1EQ8TD07 263 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 TANGO6Q9C0B7 1094 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 KIAA0100Q14667 2235 aaKnown RBP14.08□□□□□ -0.16
YBX3-217ENST00000546164 BRCA2P51587 3418 aa14.08□□□□□ -0.16
YBX3-217ENST00000546164 F5H6K3 240 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 CHMLP26374 656 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 NOVP48745 357 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 CCNA1P78396 465 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 KLRC3Q07444 240 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 FAM47AQ5JRC9 791 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 SLAIN1Q8ND83 568 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 GMCL1P1Q8NEA9 526 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 PXYLP1Q8TE99 480 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 IL25Q9H293 177 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 GABRQQ9UN88 632 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 MGAMO43451 1857 aa14.07□□□□□ -0.16
YBX3-217ENST00000546164 TSPY2A6NKD2 308 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 PEX10O60683 326 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 FLOT1O75955 427 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 NDUFB10O96000 172 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 GRK4P32298 578 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 AKNAD1Q5T1N1 836 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 RUFY2Q8WXA3 655 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 PORCNQ9H237 461 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 RNF41Q9H4P4 317 aaPredicted RBP14.06□□□□□ -0.16
YBX3-217ENST00000546164 INCENPQ9NQS7 918 aa14.06□□□□□ -0.16
YBX3-217ENST00000546164 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms