RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, human

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNTC1-215	ENST00000546125	PAPLN	O95428	1278 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	TPP2	P29144	1249 aa	Predicted RBP	4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	C9orf131	Q5VYM1	1079 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	THAP5	Q7Z6K1	395 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	ATG4D	Q86TL0	474 aa	Predicted RBP	4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	SLITRK4	Q8IW52	837 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	REXO1	Q8N1G1	1221 aa	Known RBP	4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	RNF141	Q8WVD5	230 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	ATG4C	Q96DT6	458 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	KRTAP4-2	Q9BYR5	136 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	TRIT1	Q9H3H1	467 aa	Known RBP	4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	ANTXR1	Q9H6X2	564 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	EHMT1	Q9H9B1	1298 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	METTL5	Q9NRN9	209 aa	Known RBP	4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	SLAMF8	Q9P0V8	285 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	GMIP	Q9P107	970 aa		4.06	□□□□□ -1.76
KNTC1-215	ENST00000546125	UBOX5	O94941	541 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	ESR1	P03372	595 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	POLR2B	P30876	1174 aa	Known RBP	4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	RACK1	P63244	317 aa	Known RBP	4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	CLEC16A	Q2KHT3	1053 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	OVOS1	Q6IE37	1185 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	TMPRSS7	Q7RTY8	843 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	DTWD2	Q8NBA8	298 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	RGS22	Q8NE09	1264 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	MRRF	Q96E11	262 aa	Known RBP	4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	GPATCH2	Q9NW75	528 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	DDX41	Q9UJV9	622 aa	Known RBP	4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	CTNND2	Q9UQB3	1225 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	EIF4G1	Q04637	1599 aa	Known RBP	4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	ERCC6L2	Q5T890	1561 aa		4.05	□□□□□ -1.76
KNTC1-215	ENST00000546125	DNAJC25-GNG10	A0A024R161	153 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	FAM86C2P	A6NEL3	165 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	RECK	O95980	971 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	VAMP1	P23763	118 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	AFM	P43652	599 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	RALGPS1	Q5JS13	557 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	FYB2	Q5VWT5	728 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	CDCP2	Q5VXM1	449 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	FBXW10	Q5XX13	1052 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	TTC6	Q86TZ1	520 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	ZNF654	Q8IZM8	581 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	FAM168A	Q92567	244 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	ALPK1	Q96QP1	1244 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	ASPN	Q9BXN1	380 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	GPR62	Q9BZJ7	368 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	ADAMTS10	Q9H324	1103 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	CNNM2	Q9H8M5	875 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	DUSP13	Q9UII6	198 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	CARMIL2	Q6F5E8	1435 aa		4.04	□□□□□ -1.76
KNTC1-215	ENST00000546125	BICRA	Q9NZM4	1560 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	UNCX	A6NJT0	531 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	CLEC3A	O75596	197 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	SRF	P11831	508 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	NME1	P15531	152 aa	Known RBP	4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	LTK	P29376	864 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	HK2	P52789	917 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	RNF4	P78317	190 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	EGR3	Q06889	387 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	KCNMB1	Q16558	191 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	GAB4	Q2WGN9	574 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	CYB5RL	Q6IPT4	315 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	NLRC3	Q7RTR2	1065 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	FLAD1	Q8NFF5	587 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	TMEM40	Q8WWA1	233 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	VWCE	Q96DN2	955 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	FERD3L	Q96RJ6	166 aa		4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.03	□□□□□ -1.76
KNTC1-215	ENST00000546125	SHISA3	A0PJX4	238 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	GDNF	P39905	211 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	ERVFC1	P60507	584 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	HDLBP	Q00341	1268 aa	Known RBP	4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	RAD51AP2	Q09MP3	1159 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	PAK2	Q13177	524 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	NBPF9	Q3BBW0	867 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	METTL16	Q86W50	562 aa	Known RBP	4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	ZSWIM9	Q86XI8	627 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	NT5DC4	Q86YG4	428 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	TMEM192	Q8IY95	271 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	CCDC120	Q96HB5	630 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	KIRREL1	Q96J84	757 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	SLC9A7	Q96T83	725 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	C19orf73	Q9NVV2	129 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	CCDC9	Q9Y3X0	531 aa	Known RBP	4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	PCDHA11	Q9Y5I1	949 aa		4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.02	□□□□□ -1.77
KNTC1-215	ENST00000546125	NMI	Q13287	307 aa	Predicted RBP	4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	SNW1	Q13573	536 aa	Known RBP	4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	TMEM67	Q5HYA8	995 aa		4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	OGFOD2	Q6N063	350 aa		4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	TMC3	Q7Z5M5	1100 aa		4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	SYTL4	Q96C24	671 aa	Predicted RBP	4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	LIN37	Q96GY3	246 aa	Predicted RBP	4.01	□□□□□ -1.77
KNTC1-215	ENST00000546125	SLC6A18	Q96N87	628 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms