RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 EDC3Q96F86 508 aaKnown RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 CTAGE1Q96RT6 745 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 SEC62Q99442 399 aaKnown RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 FOXP1Q9H334 677 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-225ENST00000545920 MAP10Q9P2G4 905 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 MEGF6O75095 1541 aa7.4□□□□□ -1.22
SNHG1-225ENST00000545920 ARFGEF2Q9Y6D5 1785 aa7.4□□□□□ -1.23
SNHG1-225ENST00000545920 GLI3P10071 1580 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 TNS3Q68CZ2 1445 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 A0A1B0GVL5 298 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 M0R2C6 588 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 TNFRSF10AO00220 468 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 SH2B2O14492 632 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 CYP27B1O15528 508 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 IGSF3O75054 1194 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 TADA3O75528 432 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 SERPINC1P01008 464 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 FGAP02671 866 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 SKIP12755 728 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 METAP2P50579 478 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 CEBPZQ03701 1054 aaKnown RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 TCIRG1Q13488 830 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 BRD3Q15059 726 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 PTPAQ15257 358 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 ELF2Q15723 593 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 MSS51Q4VC12 460 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 RILPL1Q5EBL4 403 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 FBXO38Q6PIJ6 1188 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 KRBA2Q6ZNG9 492 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 HOMER1Q86YM7 354 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 RABGGTAQ92696 567 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 PANX2Q96RD6 677 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 OCSTAMPQ9BR26 566 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 ALG1Q9BT22 464 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 KRT23Q9C075 422 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 EVA1BQ9NVM1 165 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 PSD3Q9NYI0 1048 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 NOVA2Q9UNW9 492 aaKnown RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 CLIC4Q9Y696 253 aa7.39□□□□□ -1.23
SNHG1-225ENST00000545920 SETD1BQ9UPS6 1966 aaKnown RBP7.39□□□□□ -1.23
SNHG1-225ENST00000545920 RGPD2P0DJD1 1756 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 COL18A1P39060 1754 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 USP27XA6NNY8 438 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 GPAA1O43292 621 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ZBTB43O43298 467 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ZRANB2O95218 330 aaKnown RBP eCLIP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ADH1BP00325 375 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 PCP11498 1178 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 IFNAR1P17181 557 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 XBP1P17861 261 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ADD2P35612 726 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 IARSP41252 1262 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 SLC20A2Q08357 652 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 TBX2Q13207 712 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 IFIT5Q13325 482 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 SART3Q15020 963 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 CFAP100Q494V2 611 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 SPECC1LQ69YQ0 1117 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 VPS37DQ86XT2 251 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 TRIM22Q8IYM9 498 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 TXLNBQ8N3L3 684 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 XAGE2Q96GT9 111 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 ORAI2Q96SN7 254 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 LRRC2Q9BYS8 371 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 GBP3Q9H0R5 595 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 RNF41Q9H4P4 317 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 NCOA5Q9HCD5 579 aaKnown RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 PRDM10Q9NQV6 1147 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 AAASQ9NRG9 546 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 KCNH3Q9ULD8 1083 aa7.38□□□□□ -1.23
SNHG1-225ENST00000545920 NAP1L2Q9ULW6 460 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-225ENST00000545920 AFDNP55196 1824 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 CCDC151A5D8V7 595 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ATP5J2-PTCD1G3V325 749 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 PNMA6AP0CW24 399 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ZNF18P17022 549 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ATF3P18847 181 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 MCM3P25205 808 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ARID4AP29374 1257 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 HOXA7P31268 230 aaPredicted RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 CASQ1P31415 396 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 SARSP49591 514 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 MMP16P51512 607 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 ANTXR2P58335 489 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 TIMM10P62072 90 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 PTK2Q05397 1052 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 SPAG1Q07617 926 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
SNHG1-225ENST00000545920 PTK7Q13308 1070 aa7.37□□□□□ -1.23
SNHG1-225ENST00000545920 TRIM14Q14142 442 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms