RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 NIP7Q9Y221 180 aaKnown RBP eCLIP17.39■□□□□ 0.37
CNN3-207ENST00000545882 SYNRGQ9UMZ2 1314 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 A0A0U1RQJ8 604 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 SEC31AO94979 1220 aaKnown RBP17.38■□□□□ 0.37
CNN3-207ENST00000545882 EVX2Q03828 476 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 ZNF174Q15697 407 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 KLHL10Q6JEL2 608 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 ATRIPQ8WXE1 791 aa17.38■□□□□ 0.37
CNN3-207ENST00000545882 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
CNN3-207ENST00000545882 XBP1P17861 261 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 IFIT1BQ5T764 474 aaKnown RBP17.37■□□□□ 0.37
CNN3-207ENST00000545882 TMCO3Q6UWJ1 677 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 XDHP47989 1333 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 ADAMTS3O15072 1205 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 TPM1P09493 284 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 E2F4Q16254 413 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 C3orf67Q6ZVT6 689 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 TMTC3Q6ZXV5 915 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 RBM28Q9NW13 759 aaKnown RBP17.37■□□□□ 0.37
CNN3-207ENST00000545882 ARGLU1Q9NWB6 273 aaPredicted RBP17.37■□□□□ 0.37
CNN3-207ENST00000545882 ADGRG1Q9Y653 693 aa17.37■□□□□ 0.37
CNN3-207ENST00000545882 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
CNN3-207ENST00000545882 TTC38Q5R3I4 469 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 CTR9Q6PD62 1173 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 IGSF22Q8N9C0 903 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 STAMQ92783 540 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 KIAA1551Q9HCM1 1747 aa17.36■□□□□ 0.37
CNN3-207ENST00000545882 PTGDRQ13258 359 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 IL17AQ16552 155 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 SRBD1Q8N5C6 995 aaKnown RBP17.35■□□□□ 0.37
CNN3-207ENST00000545882 GPR161Q8N6U8 529 aaKnown RBP17.35■□□□□ 0.37
CNN3-207ENST00000545882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
CNN3-207ENST00000545882 SEMA3EO15041 775 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 COBLO75128 1261 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 SASH3O75995 380 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 TBC1D8O95759 1140 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 BMP15O95972 392 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 CCDC175P0C221 793 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
CNN3-207ENST00000545882 CC2D1AQ6P1N0 951 aaPredicted RBP17.35■□□□□ 0.37
CNN3-207ENST00000545882 CPLX3Q8WVH0 158 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
CNN3-207ENST00000545882 MTRQ99707 1265 aa17.35■□□□□ 0.37
CNN3-207ENST00000545882 NMT2O60551 498 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 MFAP3LO75121 409 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 DDAH1O94760 285 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 FECHP22830 423 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 TEX35Q5T0J7 233 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 PDXDC2PQ6P474 469 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 FAM84BQ96KN1 310 aaPredicted RBP17.34■□□□□ 0.37
CNN3-207ENST00000545882 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
CNN3-207ENST00000545882 CCDC88AQ3V6T2 1871 aa17.34■□□□□ 0.37
CNN3-207ENST00000545882 USP17L12C9JPN9 530 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 USP17L21D6R901 530 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 ATP8B1O43520 1251 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 GYPCP04921 128 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CALM1P0DP23 149 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CALM2P0DP24 149 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CALM3P0DP25 149 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CASP14P31944 242 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 FAM193AP78312 1265 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 PPFIBP1Q86W92 1011 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CCDC12Q8WUD4 166 aaPredicted RBP17.33■□□□□ 0.37
CNN3-207ENST00000545882 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.37
CNN3-207ENST00000545882 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 CTNND2Q9UQB3 1225 aa17.33■□□□□ 0.37
CNN3-207ENST00000545882 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.36
CNN3-207ENST00000545882 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 RASGRP2Q7LDG7 609 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 IQCA1Q86XH1 822 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 RABGGTAQ92696 567 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 SMARCC1Q92922 1105 aaPredicted RBP17.33■□□□□ 0.36
CNN3-207ENST00000545882 CTAGE1Q96RT6 745 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 PARD6BQ9BYG5 372 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 LZTFL1Q9NQ48 299 aa17.33■□□□□ 0.36
CNN3-207ENST00000545882 RNF225M0QZC1 329 aaPredicted RBP17.32■□□□□ 0.36
CNN3-207ENST00000545882 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
CNN3-207ENST00000545882 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
CNN3-207ENST00000545882 BRMS1Q9HCU9 246 aa17.32■□□□□ 0.36
CNN3-207ENST00000545882 LIMA1Q9UHB6 759 aaKnown RBP17.32■□□□□ 0.36
CNN3-207ENST00000545882 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
CNN3-207ENST00000545882 ITIH6Q6UXX5 1313 aa17.32■□□□□ 0.36
CNN3-207ENST00000545882 KCNQ2O43526 872 aa17.31■□□□□ 0.36
CNN3-207ENST00000545882 ORC4O43929 436 aa17.31■□□□□ 0.36
CNN3-207ENST00000545882 KRT31Q15323 416 aa17.31■□□□□ 0.36
CNN3-207ENST00000545882 SF3B3Q15393 1217 aaKnown RBP17.31■□□□□ 0.36
CNN3-207ENST00000545882 CLEC4GQ6UXB4 293 aa17.31■□□□□ 0.36
CNN3-207ENST00000545882 NSUN4Q96CB9 384 aaKnown RBP17.31■□□□□ 0.36
CNN3-207ENST00000545882 BSDC1Q9NW68 430 aaPredicted RBP17.31■□□□□ 0.36
CNN3-207ENST00000545882 MYH1P12882 1939 aa17.31■□□□□ 0.36
CNN3-207ENST00000545882 MAST2Q6P0Q8 1798 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms