RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 GSG1L2A8MUP6 293 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 GPAA1O43292 621 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 XRCC5P13010 732 aaKnown RBP25.36■■□□□ 1.65
SCARB1-210ENST00000545493 CCDC17Q96LX7 622 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 YTHDC1Q96MU7 727 aaKnown RBP25.36■■□□□ 1.65
SCARB1-210ENST00000545493 APBA2Q99767 749 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 CEP290O15078 2479 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 RPTORQ8N122 1335 aa25.36■■□□□ 1.65
SCARB1-210ENST00000545493 PRKAR2AP13861 404 aaKnown RBP25.35■■□□□ 1.65
SCARB1-210ENST00000545493 RGS2P41220 211 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 CCL14Q16627 93 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 CCAR1Q8IX12 1150 aaKnown RBP25.35■■□□□ 1.65
SCARB1-210ENST00000545493 TANGO6Q9C0B7 1094 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 VCPKMTQ9H867 229 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 ARHGEF10LQ9HCE6 1279 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 TMX2Q9Y320 296 aa25.35■■□□□ 1.65
SCARB1-210ENST00000545493 H0YGN5 161 aa25.34■■□□□ 1.65
SCARB1-210ENST00000545493 ZFYP08048 801 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-210ENST00000545493 ZKSCAN1P17029 563 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-210ENST00000545493 CCNA1P78396 465 aa25.34■■□□□ 1.65
SCARB1-210ENST00000545493 SBK1Q52WX2 424 aa25.34■■□□□ 1.65
SCARB1-210ENST00000545493 LPAR1Q92633 364 aa25.34■■□□□ 1.65
SCARB1-210ENST00000545493 TFRCP02786 760 aaKnown RBP25.33■■□□□ 1.65
SCARB1-210ENST00000545493 MX1P20591 662 aa25.33■■□□□ 1.65
SCARB1-210ENST00000545493 GIMAP6Q6P9H5 292 aa25.33■■□□□ 1.65
SCARB1-210ENST00000545493 SPICE1Q8N0Z3 855 aa25.33■■□□□ 1.65
SCARB1-210ENST00000545493 DIS3LQ8TF46 1054 aaKnown RBP25.33■■□□□ 1.65
SCARB1-210ENST00000545493 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.33■■□□□ 1.65
SCARB1-210ENST00000545493 SH2D4AQ9H788 454 aa25.33■■□□□ 1.65
SCARB1-210ENST00000545493 HMX1Q9NP08 348 aaPredicted RBP25.33■■□□□ 1.65
SCARB1-210ENST00000545493 COL11A1P12107 1806 aaPredicted RBP25.33■■□□□ 1.64
SCARB1-210ENST00000545493 ERC2O15083 957 aa25.32■■□□□ 1.64
SCARB1-210ENST00000545493 GLRX3O76003 335 aaKnown RBP25.32■■□□□ 1.64
SCARB1-210ENST00000545493 MAP2K5Q13163 448 aa25.32■■□□□ 1.64
SCARB1-210ENST00000545493 GRB14Q14449 540 aa25.32■■□□□ 1.64
SCARB1-210ENST00000545493 HABP4Q5JVS0 413 aaKnown RBP25.32■■□□□ 1.64
SCARB1-210ENST00000545493 HTATIP2Q9BUP3 242 aa25.32■■□□□ 1.64
SCARB1-210ENST00000545493 CWC22Q9HCG8 908 aaKnown RBP25.32■■□□□ 1.64
SCARB1-210ENST00000545493 EEF2P13639 858 aaKnown RBP25.31■■□□□ 1.64
SCARB1-210ENST00000545493 CAPN2P17655 700 aa25.31■■□□□ 1.64
SCARB1-210ENST00000545493 COG2Q14746 738 aa25.31■■□□□ 1.64
SCARB1-210ENST00000545493 WDR78Q5VTH9 848 aa25.31■■□□□ 1.64
SCARB1-210ENST00000545493 TRMT44Q8IYL2 757 aaKnown RBP25.31■■□□□ 1.64
SCARB1-210ENST00000545493 DPF3Q92784 378 aa25.31■■□□□ 1.64
SCARB1-210ENST00000545493 SEC62Q99442 399 aaKnown RBP25.31■■□□□ 1.64
SCARB1-210ENST00000545493 WDR46O15213 610 aaKnown RBP25.3■■□□□ 1.64
SCARB1-210ENST00000545493 RASA1P20936 1047 aa25.3■■□□□ 1.64
SCARB1-210ENST00000545493 PTPREP23469 700 aa25.3■■□□□ 1.64
SCARB1-210ENST00000545493 MNX1P50219 401 aaPredicted RBP25.3■■□□□ 1.64
SCARB1-210ENST00000545493 CACNB2Q08289 660 aaPredicted RBP25.3■■□□□ 1.64
SCARB1-210ENST00000545493 ATG4CQ96DT6 458 aa25.3■■□□□ 1.64
SCARB1-210ENST00000545493 FSD1Q9BTV5 496 aa25.3■■□□□ 1.64
SCARB1-210ENST00000545493 MOV10L1Q9BXT6 1211 aaKnown RBP25.3■■□□□ 1.64
SCARB1-210ENST00000545493 FLRT1Q9NZU1 646 aa25.3■■□□□ 1.64
SCARB1-210ENST00000545493 SLC15A5A6NIM6 579 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 FLOT1O75955 427 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 DSG3P32926 999 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 STK11IPQ8N1F8 1099 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 ANKLE1Q8NAG6 615 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 PAWRQ96IZ0 340 aaKnown RBP25.29■■□□□ 1.64
SCARB1-210ENST00000545493 SPATC1LQ9H0A9 340 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 KANSL2Q9H9L4 492 aa25.29■■□□□ 1.64
SCARB1-210ENST00000545493 SZT2Q5T011 3432 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 MYH4Q9Y623 1939 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 MINDY4BA8MYZ0 360 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 GNAT2P19087 354 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 CCND3P30281 292 aaPredicted RBP25.28■■□□□ 1.64
SCARB1-210ENST00000545493 TDO2P48775 406 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 ATP2B2Q01814 1243 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 HDAC1Q13547 482 aaPredicted RBP25.28■■□□□ 1.64
SCARB1-210ENST00000545493 HOXC10Q9NYD6 342 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 OGDHLQ9ULD0 1010 aa25.28■■□□□ 1.64
SCARB1-210ENST00000545493 COLQQ9Y215 455 aaPredicted RBP25.28■■□□□ 1.64
SCARB1-210ENST00000545493 HOXC6P09630 235 aa25.27■■□□□ 1.64
SCARB1-210ENST00000545493 ZMYM1Q5SVZ6 1142 aa25.27■■□□□ 1.64
SCARB1-210ENST00000545493 IVNS1ABPQ9Y6Y0 642 aa25.27■■□□□ 1.64
SCARB1-210ENST00000545493 LRRFIP1Q32MZ4 808 aaKnown RBP25.26■■□□□ 1.63
SCARB1-210ENST00000545493 MB21D1Q8N884 522 aa25.26■■□□□ 1.63
SCARB1-210ENST00000545493 SHCBP1Q8NEM2 672 aa25.26■■□□□ 1.63
SCARB1-210ENST00000545493 NPLOC4Q8TAT6 608 aa25.26■■□□□ 1.63
SCARB1-210ENST00000545493 FBXO28Q9NVF7 368 aa25.26■■□□□ 1.63
SCARB1-210ENST00000545493 LAMA3Q16787 3333 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 ERCC3P19447 782 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 ANKRD45Q5TZF3 282 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 NECAB2Q7Z6G3 386 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 IFNL3Q8IZI9 196 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 PLIN4Q96Q06 1357 aa25.25■■□□□ 1.63
SCARB1-210ENST00000545493 IGKV6D-41A0A0C4DH26 115 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 FOXP2O15409 715 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 PRDM1O75626 825 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 IGHA2P01877 340 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 CHRDL2Q6WN34 429 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 MKNK2Q9HBH9 465 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 GOPCQ9HD26 462 aa25.24■■□□□ 1.63
SCARB1-210ENST00000545493 PATL2C9JE40 543 aaKnown RBP25.23■■□□□ 1.63
SCARB1-210ENST00000545493 ADORA2AP29274 412 aa25.23■■□□□ 1.63
SCARB1-210ENST00000545493 TMEM132BQ14DG7 1078 aa25.23■■□□□ 1.63
SCARB1-210ENST00000545493 FAM83BQ5T0W9 1011 aa25.23■■□□□ 1.63
SCARB1-210ENST00000545493 LHX8Q68G74 356 aa25.23■■□□□ 1.63
SCARB1-210ENST00000545493 SAMD1Q6SPF0 538 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms