RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CYP7A1P22680 504 aa18■□□□□ 0.47
RTN3-214ENST00000545432 ITGB8P26012 769 aa18■□□□□ 0.47
RTN3-214ENST00000545432 ADCYAP1R1P41586 468 aa18■□□□□ 0.47
RTN3-214ENST00000545432 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
RTN3-214ENST00000545432 WDR78Q5VTH9 848 aa18■□□□□ 0.47
RTN3-214ENST00000545432 SSH3Q8TE77 659 aa18■□□□□ 0.47
RTN3-214ENST00000545432 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
RTN3-214ENST00000545432 NRBP1Q9UHY1 535 aa18■□□□□ 0.47
RTN3-214ENST00000545432 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
RTN3-214ENST00000545432 A0A1W2PRG0 241 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 KIAA0355O15063 1070 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 FOSL2P15408 326 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 PLCD1P51178 756 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 TLE2Q04725 743 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 MB21D1Q8N884 522 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 CABP5Q9NP86 173 aa17.99■□□□□ 0.47
RTN3-214ENST00000545432 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
RTN3-214ENST00000545432 ERCC3P19447 782 aa17.98■□□□□ 0.47
RTN3-214ENST00000545432 EPHB4P54760 987 aa17.98■□□□□ 0.47
RTN3-214ENST00000545432 MROH8Q9H579 483 aa17.98■□□□□ 0.47
RTN3-214ENST00000545432 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
RTN3-214ENST00000545432 TRIM27P14373 513 aa17.97■□□□□ 0.47
RTN3-214ENST00000545432 DSG3P32926 999 aa17.97■□□□□ 0.47
RTN3-214ENST00000545432 ATP8B2P98198 1209 aa17.97■□□□□ 0.47
RTN3-214ENST00000545432 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
RTN3-214ENST00000545432 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
RTN3-214ENST00000545432 RIOK1Q9BRS2 568 aaKnown RBP17.97■□□□□ 0.47
RTN3-214ENST00000545432 PRDM5Q9NQX1 630 aaPredicted RBP17.97■□□□□ 0.47
RTN3-214ENST00000545432 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
RTN3-214ENST00000545432 ROBO3Q96MS0 1386 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 GRIN2CQ14957 1233 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 SEPT2Q15019 361 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 TJAP1Q5JTD0 557 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 ANO1Q5XXA6 986 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 MIGA1Q8NAN2 632 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 ADAMTS5Q9UNA0 930 aa17.96■□□□□ 0.47
RTN3-214ENST00000545432 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 CLTBP09497 229 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 USP5P45974 858 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 FERMT2Q96AC1 680 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 DIS3Q9Y2L1 958 aaKnown RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 MYH1P12882 1939 aa17.95■□□□□ 0.46
RTN3-214ENST00000545432 MYO5AQ9Y4I1 1855 aaKnown RBP17.95■□□□□ 0.46
RTN3-214ENST00000545432 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
RTN3-214ENST00000545432 USP38Q8NB14 1042 aa17.94■□□□□ 0.46
RTN3-214ENST00000545432 EAF2Q96CJ1 260 aaPredicted RBP17.94■□□□□ 0.46
RTN3-214ENST00000545432 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
RTN3-214ENST00000545432 TNNQ9UQP3 1299 aa17.94■□□□□ 0.46
RTN3-214ENST00000545432 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 TNFRSF10AO00220 468 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 IDH1O75874 414 aaKnown RBP17.93■□□□□ 0.46
RTN3-214ENST00000545432 MAGEB6Q8N7X4 407 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 TSEN34Q9BSV6 310 aaKnown RBP17.93■□□□□ 0.46
RTN3-214ENST00000545432 TLR7Q9NYK1 1049 aaKnown RBP17.93■□□□□ 0.46
RTN3-214ENST00000545432 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 NCOR1O75376 2440 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 SMCHD1A6NHR9 2005 aa17.93■□□□□ 0.46
RTN3-214ENST00000545432 SLC25A27O95847 323 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 DNAJB2P25686 324 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 ZNF792Q3KQV3 632 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 RASIP1Q5U651 963 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 RNF180Q86T96 592 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 ANTXR1Q9H6X2 564 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 XPNPEP3Q9NQH7 507 aa17.92■□□□□ 0.46
RTN3-214ENST00000545432 ADAMTS4O75173 837 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 ZNF865P0CJ78 1059 aaPredicted RBP17.91■□□□□ 0.46
RTN3-214ENST00000545432 RARBP10826 455 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 FCER1AP12319 257 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 RAG1P15918 1043 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 COL9A1P20849 921 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 FPGSQ05932 587 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 MAP3K12Q12852 859 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 CCSAPQ6IQ19 270 aaPredicted RBP17.91■□□□□ 0.46
RTN3-214ENST00000545432 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 TINF2Q9BSI4 451 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 ZNF576Q9H609 170 aa17.91■□□□□ 0.46
RTN3-214ENST00000545432 A0A1W2PQ45 241 aaPredicted RBP17.9■□□□□ 0.46
RTN3-214ENST00000545432 A0A1W2PQY0 241 aa17.9■□□□□ 0.46
RTN3-214ENST00000545432 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
RTN3-214ENST00000545432 TMEM132BQ14DG7 1078 aa17.9■□□□□ 0.46
RTN3-214ENST00000545432 TMEM179Q6ZVK1 233 aa17.9■□□□□ 0.46
RTN3-214ENST00000545432 NCAPG2Q86XI2 1143 aa17.9■□□□□ 0.46
RTN3-214ENST00000545432 KLHDC9Q8NEP7 349 aa17.9■□□□□ 0.46
RTN3-214ENST00000545432 ATXN2LQ8WWM7 1075 aaKnown RBP17.9■□□□□ 0.46
RTN3-214ENST00000545432 CCDC8Q9H0W5 538 aaPredicted RBP17.9■□□□□ 0.46
RTN3-214ENST00000545432 PGK1P00558 417 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 POLR3DP05423 398 aaPredicted RBP17.89■□□□□ 0.45
RTN3-214ENST00000545432 EVX2Q03828 476 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 AKNAD1Q5T1N1 836 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 C16orf59Q7L2K0 433 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 RIOX2Q8IUF8 465 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 TANGO6Q9C0B7 1094 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms