RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 TRANK1O15050 2925 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 GPR75-ASB3A0A0A6YYF3 556 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 ASNSP08243 561 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 CYBAP13498 195 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 EPHB4P54760 987 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 JAG1P78504 1218 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 SNX17Q15036 470 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 ZYXQ15942 572 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 E2F4Q16254 413 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 TEX11Q8IYF3 940 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 WDR18Q9BV38 432 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 HERC5Q9UII4 1024 aaKnown RBP10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 ZBTB21Q9ULJ3 1066 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 MUC6Q6W4X9 2439 aa10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-221ENST00000545367 CNMDO75829 334 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 ATP2B2Q01814 1243 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 PI16Q6UXB8 463 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 SLC39A5Q6ZMH5 540 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 IL27Q8NEV9 243 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 NPLOC4Q8TAT6 608 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 FERMT2Q96AC1 680 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 TIFAQ96CG3 184 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 EDC3Q96F86 508 aaKnown RBP10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 NECAB3Q96P71 396 aaPredicted RBP10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 FEZ1Q99689 392 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 CEP126Q9P2H0 1117 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 IVNS1ABPQ9Y6Y0 642 aa10.59□□□□□ -0.71
NPIPB4-221ENST00000545367 MCM3APO60318 1980 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 CIAO1O76071 339 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 PTPREP23469 700 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 ITGB8P26012 769 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 ADCYAP1R1P41586 468 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 CCNA1P78396 465 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 GRB14Q14449 540 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 SH3RF3Q8TEJ3 882 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 GAS2L1Q99501 681 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 TRIM34Q9BYJ4 488 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 ZNF576Q9H609 170 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 PA2G4Q9UQ80 394 aaKnown RBP10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 FLT1P17948 1338 aa10.58□□□□□ -0.72
NPIPB4-221ENST00000545367 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 C19orf81C9J6K1 198 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 PQBP1O60828 265 aaKnown RBP10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 CLTBP09497 229 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 TLE2Q04725 743 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 FPGSQ05932 587 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 FAM47AQ5JRC9 791 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 ARRDC4Q8NCT1 418 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 ATXN2LQ8WWM7 1075 aaKnown RBP10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 USP44Q9H0E7 712 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 PRDM12Q9H4Q4 367 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 RABGAP1Q9Y3P9 1069 aa10.57□□□□□ -0.72
NPIPB4-221ENST00000545367 HOXC6P09630 235 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 RAG1P15918 1043 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 GSTO1P78417 241 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 CCDC85BQ15834 202 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 MAPKAPK5Q8IW41 473 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 NSUN4Q96CB9 384 aaKnown RBP10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 RAI14Q9P0K7 980 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 BTBD7Q9P203 1132 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 PI4KBQ9UBF8 816 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 SAP30BPQ9UHR5 308 aaKnown RBP10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 PTPRCP08575 1304 aa10.56□□□□□ -0.72
NPIPB4-221ENST00000545367 A0A1B0GUL7 405 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 SEPT4O43236 478 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 VCAM1P19320 739 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 ADORA2AP29274 412 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 PBX2P40425 430 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 MRPS5P82675 430 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 MVPQ14764 893 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 LRRC41Q15345 812 aa10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 NOL10Q9BSC4 688 aaKnown RBP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 AATFQ9NY61 560 aaKnown RBP eCLIP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
NPIPB4-221ENST00000545367 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L15C9J2P7 530 aa10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L13C9JLJ4 530 aa10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L11C9JVI0 530 aa10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L18D6R9N7 530 aa10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L22D6RA61 530 aa10.54□□□□□ -0.72
NPIPB4-221ENST00000545367 USP17L17D6RBQ6 530 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms