RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 BRF1Q92994 677 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 CABP5Q9NP86 173 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 TNKSO95271 1327 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 PHF20L1A8MW92 1017 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 SH2B2O14492 632 aaPredicted RBP11.14□□□□□ -0.63
SP140-214ENST00000544128 MAP3K13O43283 966 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 USP2O75604 605 aaPredicted RBP11.14□□□□□ -0.63
SP140-214ENST00000544128 GH2P01242 217 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 SOX10P56693 466 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 APOBRQ0VD83 1088 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 GRM1Q13255 1194 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 WTAPQ15007 396 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 CCDC178Q5BJE1 867 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
SP140-214ENST00000544128 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 IL17RBQ9NRM6 502 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 TCP11L1Q9NUJ3 509 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 SSC5DA1L4H1 1573 aa11.14□□□□□ -0.63
SP140-214ENST00000544128 IGKV6D-41A0A0C4DH26 115 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 PPP1R12BO60237 982 aaPredicted RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 CTNND1O60716 968 aaKnown RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 INPP5BP32019 993 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 CAP2P40123 477 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 SEPT2Q15019 361 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 ANKRD1Q15327 319 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 SEC23AQ15436 765 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 IFIT1BQ5T764 474 aaKnown RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 NFXL1Q6ZNB6 911 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 CLEC10AQ8IUN9 316 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 SNX21Q969T3 373 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 CEP95Q96GE4 821 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 MS4A4AQ96JQ5 239 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 WRNIP1Q96S55 665 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 AGXT2Q9BYV1 514 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 LY9Q9HBG7 655 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 ZNF112Q9UJU3 913 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 NAP1L2Q9ULW6 460 aaPredicted RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 ANGEL1Q9UNK9 670 aaKnown RBP11.13□□□□□ -0.63
SP140-214ENST00000544128 PLIN4Q96Q06 1357 aa11.13□□□□□ -0.63
SP140-214ENST00000544128 KLF18A0A0U1RQI7 1052 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 GUCY1A2P33402 732 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 LIFRP42702 1097 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 IREB2P48200 963 aaKnown RBP11.12□□□□□ -0.63
SP140-214ENST00000544128 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 RCSD1Q6JBY9 416 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 CYP4F22Q6NT55 531 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 MOB2Q70IA6 237 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 DGKHQ86XP1 1220 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 TMTC2Q8N394 836 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 ZKSCAN4Q969J2 545 aaPredicted RBP11.12□□□□□ -0.63
SP140-214ENST00000544128 KANSL2Q9H9L4 492 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
SP140-214ENST00000544128 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 ATAD5Q96QE3 1844 aa11.12□□□□□ -0.63
SP140-214ENST00000544128 GREB1LQ9C091 1923 aaPredicted RBP11.11□□□□□ -0.63
SP140-214ENST00000544128 ASNSP08243 561 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
SP140-214ENST00000544128 MCM2P49736 904 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 ICA1Q05084 483 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 STK3Q13188 491 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 BECN1Q14457 450 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 PPP4R3BQ5MIZ7 849 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 ARMC9Q7Z3E5 817 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 CCDC84Q86UT8 332 aaPredicted RBP11.11□□□□□ -0.63
SP140-214ENST00000544128 RAB11FIP4Q86YS3 637 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 SCYL3Q8IZE3 742 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.11□□□□□ -0.63
SP140-214ENST00000544128 ANKS1AQ92625 1134 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 TMEM47Q9BQJ4 181 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 TPCN1Q9ULQ1 816 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
SP140-214ENST00000544128 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
SP140-214ENST00000544128 AOC2O75106 756 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 CELF2O95319 508 aaKnown RBP11.1□□□□□ -0.63
SP140-214ENST00000544128 LARGE1O95461 756 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 TTLL1O95922 423 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms