RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 IGHDP01880 384 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GNAT2P19087 354 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 RASA1P20936 1047 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 MAPK4P31152 587 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 ICA1Q05084 483 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 TRIM32Q13049 653 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 GPR142Q7Z601 462 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 AMOTL1Q8IY63 956 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 IFNL3Q8IZI9 196 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 VCPKMTQ9H867 229 aa15.71■□□□□ 0.11
TNFRSF1A-215ENST00000543359 SGPL1O95470 568 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 XRCC5P13010 732 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 COG2Q14746 738 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 LRRFIP1Q32MZ4 808 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 U2AF1L4Q8WU68 220 aaKnown RBP15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 LPAR1Q92633 364 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 FSD1Q9BTV5 496 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 KANSL2Q9H9L4 492 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 PARP14Q460N5 1801 aa15.7■□□□□ 0.1
TNFRSF1A-215ENST00000543359 A0A0G2JMZ2 1700 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 IGKV6D-41A0A0C4DH26 115 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MINDY4BA8MYZ0 360 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 HMGCRP04035 888 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CYP2B6P20813 491 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MAP3K21Q5TCX8 1036 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 PLEKHH3Q7Z736 793 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 NKX2-3Q8TAU0 364 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 TRIB2Q92519 343 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 NUDT12Q9BQG2 462 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CRISPLD2Q9H0B8 497 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 ARHGEF10LQ9HCE6 1279 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 HOXC10Q9NYD6 342 aa15.69■□□□□ 0.1
TNFRSF1A-215ENST00000543359 DSG3P32926 999 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SPICE1Q8N0Z3 855 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SOCS4Q8WXH5 440 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 EVI5LQ96CN4 794 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 ADAMTS5Q9UNA0 930 aa15.68■□□□□ 0.1
TNFRSF1A-215ENST00000543359 IGHA2P01877 340 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 APPP05067 770 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CCNA1P78396 465 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CCDC129Q6ZRS4 1044 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 STK11IPQ8N1F8 1099 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SH2D4AQ9H788 454 aa15.67■□□□□ 0.1
TNFRSF1A-215ENST00000543359 WDR46O15213 610 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 PRDM1O75626 825 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 PTPREP23469 700 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 RGS2P41220 211 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 TDO2P48775 406 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 NUCB1Q02818 461 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CCL14Q16627 93 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 TICAM2Q86XR7 235 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MOV10L1Q9BXT6 1211 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 TANGO6Q9C0B7 1094 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SPATC1LQ9H0A9 340 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MKNK2Q9HBH9 465 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SUPT16HQ9Y5B9 1047 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 RPTORQ8N122 1335 aa15.66■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SLC15A5A6NIM6 579 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 HOXC6P09630 235 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CAPN2P17655 700 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MAP2K5Q13163 448 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 GRB14Q14449 540 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 PLEKHM2Q8IWE5 1019 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 MKL1Q969V6 931 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 OSBPL3Q9H4L5 887 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 FLRT1Q9NZU1 646 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 SZT2Q5T011 3432 aa15.65■□□□□ 0.1
TNFRSF1A-215ENST00000543359 A0A0D9SFI3 127 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FLOT1O75955 427 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PPARAQ07869 468 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CACNB2Q08289 660 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 CCAR1Q8IX12 1150 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 TRMT44Q8IYL2 757 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 MB21D1Q8N884 522 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 SHCBP1Q8NEM2 672 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 FAM227BQ96M60 508 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 APBA2Q99767 749 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 NACAP1Q9BZK3 213 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 HMX1Q9NP08 348 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 COL11A1P12107 1806 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-215ENST00000543359 PLIN4Q96Q06 1357 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms