RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 KLRG1Q96E93 195 aa12.44□□□□□ -0.42
DDB1-221ENST00000543162 MAP3K14Q99558 947 aa12.44□□□□□ -0.42
DDB1-221ENST00000543162 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
DDB1-221ENST00000543162 FAM217BQ9NTX9 383 aaPredicted RBP12.44□□□□□ -0.42
DDB1-221ENST00000543162 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
DDB1-221ENST00000543162 FZD1Q9UP38 647 aa12.44□□□□□ -0.42
DDB1-221ENST00000543162 DOCK1Q14185 1865 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 PTPDC1A2A3K4 754 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 CTDNEP1O95476 244 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 GNAQP50148 359 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 HMGN5P82970 282 aaKnown RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 GRM4Q14833 912 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 NSUN7Q8NE18 718 aaKnown RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDB1-221ENST00000543162 ZKSCAN4Q969J2 545 aaPredicted RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 SH2D4AQ9H788 454 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.43□□□□□ -0.42
DDB1-221ENST00000543162 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
DDB1-221ENST00000543162 USP17L5A8MUK1 530 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 TRAF5O00463 557 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 RAD21O60216 631 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 JAK2O60674 1132 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 DTNBO60941 627 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 PARP1P09874 1014 aaKnown RBP12.42□□□□□ -0.42
DDB1-221ENST00000543162 GJB2P29033 226 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 NOL9Q5SY16 702 aaKnown RBP12.42□□□□□ -0.42
DDB1-221ENST00000543162 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 DDX11Q96FC9 970 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 GPBP1L1Q9HC44 474 aaPredicted RBP12.42□□□□□ -0.42
DDB1-221ENST00000543162 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 CSADQ9Y600 493 aa12.42□□□□□ -0.42
DDB1-221ENST00000543162 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 F5H6K3 240 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 PDHBP11177 359 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 IFNAR1P17181 557 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 ECE1P42892 770 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 KLRC3Q07444 240 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 NTRK3Q16288 839 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 ASPRV1Q53RT3 343 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 SLFN13Q68D06 897 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 CHADLQ6NUI6 762 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 USP17L2Q6R6M4 530 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 TMTC3Q6ZXV5 915 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
DDB1-221ENST00000543162 TRIM22Q8IYM9 498 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 DCAF4Q8WV16 495 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 FEZ1Q99689 392 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 LZTS2Q9BRK4 669 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 ZNF408Q9H9D4 720 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 GOPCQ9HD26 462 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
DDB1-221ENST00000543162 PALM3A6NDB9 673 aaPredicted RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 KLRF2D3W0D1 207 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 PPFIA3O75145 1194 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 NDUFB10O96000 172 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 GOLGA8HP0CJ92 632 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 PTPRAP18433 802 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 PDCP20941 246 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 DDIT3P35638 169 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 SLC1A4P43007 532 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 VGLL4Q14135 290 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 ANKRD13AQ8IZ07 590 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 PHKBQ93100 1093 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 GMCL1Q96IK5 515 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 WDR18Q9BV38 432 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 SLC26A6Q9BXS9 759 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 CHMP5Q9NZZ3 219 aa12.4□□□□□ -0.42
DDB1-221ENST00000543162 ORC3Q9UBD5 711 aaPredicted RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 ISY1Q9ULR0 285 aaKnown RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
DDB1-221ENST00000543162 FRMPD2Q68DX3 1309 aaPredicted RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 STK36Q9NRP7 1315 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 FMR1Q06787 632 aaKnown RBP eCLIP12.39□□□□□ -0.431e-7■■■□□ 15.8
DDB1-221ENST00000543162 FUT2Q10981 343 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 ZYXQ15942 572 aaKnown RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 MAP3K11Q16584 847 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
DDB1-221ENST00000543162 MOB2Q70IA6 237 aa12.39□□□□□ -0.43
DDB1-221ENST00000543162 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms