RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 USP17L21D6R901 530 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 CNMDO75829 334 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 ZFYP08048 801 aaPredicted RBP15.75■□□□□ 0.11
RTN3-212ENST00000543123 TRIM32Q13049 653 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 MFSD14CQ5VZR4 134 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 OGDHLQ9ULD0 1010 aa15.75■□□□□ 0.11
RTN3-212ENST00000543123 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
RTN3-212ENST00000543123 A0A1W2PRG0 241 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 AKR1B1P15121 316 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 PTPREP23469 700 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 CDK8P49336 464 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 EVX2Q03828 476 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 BTBD7Q9P203 1132 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 TMX2Q9Y320 296 aa15.74■□□□□ 0.11
RTN3-212ENST00000543123 TRIOBPQ9H2D6 2365 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 ERC2O15083 957 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 WDR46O15213 610 aaKnown RBP15.73■□□□□ 0.11
RTN3-212ENST00000543123 STRNO43815 780 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 FLOT1O75955 427 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 HOXC6P09630 235 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 GNAT2P19087 354 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 FXR1P51114 621 aaKnown RBP eCLIP15.73■□□□□ 0.11
RTN3-212ENST00000543123 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
RTN3-212ENST00000543123 GRB14Q14449 540 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 SLFNL1Q499Z3 407 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 SHCBP1Q8NEM2 672 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 APPBP2Q92624 585 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 PUS7LQ9H0K6 701 aaKnown RBP15.73■□□□□ 0.11
RTN3-212ENST00000543123 C11orf49Q9H6J7 331 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 SLC5A4Q9NY91 659 aa15.73■□□□□ 0.11
RTN3-212ENST00000543123 TTC41PQ6P2S7 1318 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 A0A0G2JMZ2 1700 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 A0A1W2PPC1 479 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 MSCO60682 206 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 ATP2B2Q01814 1243 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 CCL14Q16627 93 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 CTR9Q6PD62 1173 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 DIS3LQ8TF46 1054 aaKnown RBP15.72■□□□□ 0.11
RTN3-212ENST00000543123 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
RTN3-212ENST00000543123 SPATC1LQ9H0A9 340 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 MROH8Q9H579 483 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 ZBTB47Q9UFB7 747 aaPredicted RBP15.72■□□□□ 0.11
RTN3-212ENST00000543123 ZNF236Q9UL36 1845 aa15.72■□□□□ 0.11
RTN3-212ENST00000543123 CYP2D7A0A087X1C5 515 aa15.71■□□□□ 0.11
RTN3-212ENST00000543123 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
RTN3-212ENST00000543123 SBK1Q52WX2 424 aa15.71■□□□□ 0.11
RTN3-212ENST00000543123 DPP9Q86TI2 863 aa15.71■□□□□ 0.11
RTN3-212ENST00000543123 SPICE1Q8N0Z3 855 aa15.71■□□□□ 0.11
RTN3-212ENST00000543123 MOV10L1Q9BXT6 1211 aaKnown RBP15.71■□□□□ 0.11
RTN3-212ENST00000543123 MKNK2Q9HBH9 465 aa15.71■□□□□ 0.11
RTN3-212ENST00000543123 CHGBP05060 677 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 EEF2P13639 858 aaKnown RBP15.7■□□□□ 0.1
RTN3-212ENST00000543123 DSG3P32926 999 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 TDO2P48775 406 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 PLS1Q14651 629 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 CLEC10AQ8IUN9 316 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 ABRAQ8N0Z2 381 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 NACAP1Q9BZK3 213 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 RBM27Q9P2N5 1060 aaKnown RBP15.7■□□□□ 0.1
RTN3-212ENST00000543123 ROBO3Q96MS0 1386 aa15.7■□□□□ 0.1
RTN3-212ENST00000543123 GPAA1O43292 621 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 SLC25A27O95847 323 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 ERCC3P19447 782 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 ADORA2AP29274 412 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 CCND3P30281 292 aaPredicted RBP15.69■□□□□ 0.1
RTN3-212ENST00000543123 COPB2P35606 906 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 TSHZ3Q63HK5 1081 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 OLFML2BQ68BL8 750 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 NCAPG2Q86XI2 1143 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 SIAH1Q8IUQ4 282 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 C7orf61Q8IZ16 206 aa15.69■□□□□ 0.1
RTN3-212ENST00000543123 GSG1L2A8MUP6 293 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 RAD21O60216 631 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 APPP05067 770 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 RRP1P56182 461 aaKnown RBP15.68■□□□□ 0.1
RTN3-212ENST00000543123 KIAA1755Q5JYT7 1200 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 LHX8Q68G74 356 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 SAMD1Q6SPF0 538 aaPredicted RBP15.68■□□□□ 0.1
RTN3-212ENST00000543123 OSBP2Q969R2 916 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 ATG4CQ96DT6 458 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 PRO3102Q9H379 93 aa15.68■□□□□ 0.1
RTN3-212ENST00000543123 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
RTN3-212ENST00000543123 RLFQ13129 1914 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 SLC3A2P08195 630 aaKnown RBP15.67■□□□□ 0.1
RTN3-212ENST00000543123 FCER1AP12319 257 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 CNGA1P29973 690 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
RTN3-212ENST00000543123 FSD1Q9BTV5 496 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 FLRT1Q9NZU1 646 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 PCDHB15Q9Y5E8 787 aa15.67■□□□□ 0.1
RTN3-212ENST00000543123 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms