RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ADGRA1Q86SQ6 560 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 SRP68Q9UHB9 627 aaKnown RBP18.87■□□□□ 0.61
KDM2B-216ENST00000543025 MRFAP1Q9Y605 127 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 MAGEB6P1A0A0J9YX57 407 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 AKR1B15C9JRZ8 316 aaPredicted RBP18.87■□□□□ 0.61
KDM2B-216ENST00000543025 BMP15O95972 392 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 ADRA2BP18089 450 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 PKN1Q16512 942 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 SPATA1Q5VX52 437 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 SHISA4Q96DD7 197 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 PANX2Q96RD6 677 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 NARFQ9UHQ1 456 aa18.87■□□□□ 0.61
KDM2B-216ENST00000543025 SH3RF1Q7Z6J0 888 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 FERMT2Q96AC1 680 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 KIFC2Q96AC6 838 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 EPSTI1Q96J88 318 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 ZSCAN10Q96SZ4 725 aaPredicted RBP18.86■□□□□ 0.61
KDM2B-216ENST00000543025 ST7Q9NRC1 585 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
KDM2B-216ENST00000543025 A0A087X0B3 334 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 FAM205CA6NFA0 338 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 AFMP43652 599 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 ENAHQ8N8S7 591 aaPredicted RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 RBM28Q9NW13 759 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 ABCF2Q9UG63 623 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 CCDC175P0C221 793 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 PPP2R3AQ06190 1150 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 IFIT1BQ5T764 474 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 APTXQ7Z2E3 356 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 CATIPQ7Z7H3 387 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 PAGE5Q96GU1 130 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 CTAGE1Q96RT6 745 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 NAA15Q9BXJ9 866 aaKnown RBP18.85■□□□□ 0.61
KDM2B-216ENST00000543025 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 TFCP2L1Q9NZI6 479 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 QSER1Q2KHR3 1735 aa18.85■□□□□ 0.61
KDM2B-216ENST00000543025 RFC4P35249 363 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 FUT2Q10981 343 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 CUL4BQ13620 913 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 EARS2Q5JPH6 523 aaKnown RBP18.84■□□□□ 0.61
KDM2B-216ENST00000543025 GPR161Q8N6U8 529 aaKnown RBP18.84■□□□□ 0.61
KDM2B-216ENST00000543025 DESI2Q9BSY9 194 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 DUOX1Q9NRD9 1551 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 ATP8B1O43520 1251 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 KLHL10Q6JEL2 608 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 IQSEC3Q9UPP2 1182 aaPredicted RBP18.84■□□□□ 0.61
KDM2B-216ENST00000543025 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
KDM2B-216ENST00000543025 TEX33O43247 280 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 ZPR1O75312 459 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 PRDM1O75626 825 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.61
KDM2B-216ENST00000543025 PLA2G4AP47712 749 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 DPYDQ12882 1025 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 TAF3Q5VWG9 929 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 PPFIBP1Q86W92 1011 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 IQCA1Q86XH1 822 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 IGSF22Q8N9C0 903 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 RIOK1Q9BRS2 568 aaKnown RBP18.83■□□□□ 0.61
KDM2B-216ENST00000543025 ZNF804BA4D1E1 1349 aa18.83■□□□□ 0.61
KDM2B-216ENST00000543025 SEMA3EO15041 775 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 NTSR2O95665 410 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 CALM1P0DP23 149 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 CALM2P0DP24 149 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 CALM3P0DP25 149 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.6
KDM2B-216ENST00000543025 UPF1Q92900 1129 aaKnown RBP eCLIP18.83■□□□□ 0.6
KDM2B-216ENST00000543025 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
KDM2B-216ENST00000543025 V9GY48 417 aaPredicted RBP18.83■□□□□ 0.6
KDM2B-216ENST00000543025 SOWAHDA6NJG2 315 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 PLEKHA8P1O95397 391 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 STX17P56962 302 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 CLEC4GQ6UXB4 293 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 GNL3LQ9NVN8 582 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 COL24A1Q17RW2 1714 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 RGL2O15211 777 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 PCP11498 1178 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 PBX1P40424 430 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 RBL2Q08999 1139 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 MTF1Q14872 753 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 KARSQ15046 597 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 FILIP1LQ4L180 1135 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 RSRC2Q7L4I2 434 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 CCDC12Q8WUD4 166 aaPredicted RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 MRPL44Q9H9J2 332 aaKnown RBP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 NIP7Q9Y221 180 aaKnown RBP eCLIP18.82■□□□□ 0.6
KDM2B-216ENST00000543025 LAMB2P55268 1798 aa18.82■□□□□ 0.6
KDM2B-216ENST00000543025 hCG_1642624A0A1W2PR95 340 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 TROAPQ12815 778 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 BRIP1Q9BX63 1249 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 CASP1P29466 404 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 TEX35Q5T0J7 233 aa18.81■□□□□ 0.6
KDM2B-216ENST00000543025 PPP1R3GB7ZBB8 358 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 DDAH1O94760 285 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 TTC38Q5R3I4 469 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms