RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 FAM84AQ96KN4 292 aa6.27□□□□□ -1.41
LEMD3-204ENST00000542032 CCDC74BQ96LY2 380 aa6.27□□□□□ -1.41
LEMD3-204ENST00000542032 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
LEMD3-204ENST00000542032 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
LEMD3-204ENST00000542032 SLC22A31A6NKX4 558 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 ESR1P03372 595 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 MESP2Q0VG99 397 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 GAB4Q2WGN9 574 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 REXO1Q8N1G1 1221 aaKnown RBP6.26□□□□□ -1.41
LEMD3-204ENST00000542032 DTWD2Q8NBA8 298 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 BAHD1Q8TBE0 780 aaPredicted RBP6.26□□□□□ -1.41
LEMD3-204ENST00000542032 UBE2FQ969M7 185 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 GPR62Q9BZJ7 368 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 CARS2Q9HA77 564 aaKnown RBP6.26□□□□□ -1.41
LEMD3-204ENST00000542032 C19orf73Q9NVV2 129 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 UBP1Q9NZI7 540 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 CTNND2Q9UQB3 1225 aa6.26□□□□□ -1.41
LEMD3-204ENST00000542032 RGS13O14921 159 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 RECKO95980 971 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 TMPRSS7Q7RTY8 843 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 EAF1Q96JC9 268 aaPredicted RBP6.25□□□□□ -1.41
LEMD3-204ENST00000542032 KREMEN1Q96MU8 473 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 KLHL3Q9UH77 587 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
LEMD3-204ENST00000542032 ZNF76P36508 570 aa6.24□□□□□ -1.41
LEMD3-204ENST00000542032 CTSWP56202 376 aa6.24□□□□□ -1.41
LEMD3-204ENST00000542032 TRIM26Q12899 539 aaPredicted RBP6.24□□□□□ -1.41
LEMD3-204ENST00000542032 ASPNQ9BXN1 380 aa6.24□□□□□ -1.41
LEMD3-204ENST00000542032 GMIPQ9P107 970 aa6.24□□□□□ -1.41
LEMD3-204ENST00000542032 ZSWIM5Q9P217 1185 aa6.24□□□□□ -1.41
LEMD3-204ENST00000542032 MEIS3P2A8K0S8 358 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 WASH4PA8MWX3 477 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 LRRN2O75325 713 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 UBOX5O94941 541 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 CLCQ05315 142 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 APOBRQ0VD83 1088 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 SEZ6Q53EL9 994 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 ARSHQ5FYA8 562 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 BHLHE22Q8NFJ8 381 aaPredicted RBP6.23□□□□□ -1.41
LEMD3-204ENST00000542032 TMEM40Q8WWA1 233 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 KIF2CQ99661 725 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 TRIT1Q9H3H1 467 aaKnown RBP6.23□□□□□ -1.41
LEMD3-204ENST00000542032 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 KCNH3Q9ULD8 1083 aa6.23□□□□□ -1.41
LEMD3-204ENST00000542032 INHBBP09529 407 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 TPP2P29144 1249 aaPredicted RBP6.22□□□□□ -1.41
LEMD3-204ENST00000542032 MLECQ14165 292 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 OVOS1Q6IE37 1185 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 TSPYL5Q86VY4 417 aaPredicted RBP6.22□□□□□ -1.41
LEMD3-204ENST00000542032 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 NKD1Q969G9 470 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 ATG4CQ96DT6 458 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 SPON2Q9BUD6 331 aa6.22□□□□□ -1.41
LEMD3-204ENST00000542032 GDNFP39905 211 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 CCNFP41002 786 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 ZNF165P49910 485 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 RACK1P63244 317 aaKnown RBP6.21□□□□□ -1.42
LEMD3-204ENST00000542032 USP48Q86UV5 1035 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 ALPK1Q96QP1 1244 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 GPATCH2Q9NW75 528 aa6.21□□□□□ -1.42
LEMD3-204ENST00000542032 TNFRSF10CO14798 259 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
LEMD3-204ENST00000542032 GBP1P32455 592 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 ZNF394Q53GI3 561 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 DBX2Q6ZNG2 339 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 GK5Q6ZS86 529 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 METTL16Q86W50 562 aaKnown RBP6.2□□□□□ -1.42
LEMD3-204ENST00000542032 RNF34Q969K3 372 aa6.2□□□□□ -1.42
LEMD3-204ENST00000542032 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.2□□□□□ -1.42
LEMD3-204ENST00000542032 DDX41Q9UJV9 622 aaKnown RBP6.2□□□□□ -1.42
LEMD3-204ENST00000542032 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 SHISA3A0PJX4 238 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 ZNF503-AS2A6NEH8 195 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
LEMD3-204ENST00000542032 SCAMP3O14828 347 aaKnown RBP6.19□□□□□ -1.42
LEMD3-204ENST00000542032 RAG1P15918 1043 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 AFMP43652 599 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 TNNI2P48788 182 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 LRRFIP1Q32MZ4 808 aaKnown RBP6.19□□□□□ -1.42
LEMD3-204ENST00000542032 NBPF12Q5TAG4 269 aaPredicted RBP6.19□□□□□ -1.42
LEMD3-204ENST00000542032 NLRC3Q7RTR2 1065 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 ZSWIM9Q86XI8 627 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 CREG2Q8IUH2 290 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 RGS22Q8NE09 1264 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 CCDC120Q96HB5 630 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 ANTXR1Q9H6X2 564 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 ZNF281Q9Y2X9 895 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 PCDHGB7Q9Y5F8 929 aa6.19□□□□□ -1.42
LEMD3-204ENST00000542032 POLR2BP30876 1174 aaKnown RBP6.18□□□□□ -1.42
LEMD3-204ENST00000542032 RAD51AP2Q09MP3 1159 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 RALGPS1Q5JS13 557 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
LEMD3-204ENST00000542032 HDAC8Q9BY41 377 aa6.18□□□□□ -1.42
LEMD3-204ENST00000542032 SP110Q9HB58 689 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms