RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 RAD21O60216 631 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
SUDS3-203ENST00000541591 CCND3P30281 292 aaPredicted RBP16.86■□□□□ 0.29
SUDS3-203ENST00000541591 MAPK4P31152 587 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 MORN1Q5T089 497 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 ZSCAN25Q6NSZ9 544 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 TMEM179Q6ZVK1 233 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 KBTBD3Q8NAB2 608 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 FLRT1Q9NZU1 646 aa16.86■□□□□ 0.29
SUDS3-203ENST00000541591 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
SUDS3-203ENST00000541591 C16orf86Q6ZW13 317 aa16.85■□□□□ 0.29
SUDS3-203ENST00000541591 AMOTL1Q8IY63 956 aa16.85■□□□□ 0.29
SUDS3-203ENST00000541591 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
SUDS3-203ENST00000541591 STRBPQ96SI9 672 aaKnown RBP16.85■□□□□ 0.29
SUDS3-203ENST00000541591 EPB41L4AQ9HCS5 686 aaPredicted RBP16.85■□□□□ 0.29
SUDS3-203ENST00000541591 HMX1Q9NP08 348 aaPredicted RBP16.85■□□□□ 0.29
SUDS3-203ENST00000541591 RABGAP1Q9Y3P9 1069 aa16.85■□□□□ 0.29
SUDS3-203ENST00000541591 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
SUDS3-203ENST00000541591 GPAA1O43292 621 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 EEF2P13639 858 aaKnown RBP16.84■□□□□ 0.29
SUDS3-203ENST00000541591 RGS2P41220 211 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 CACNB2Q08289 660 aaPredicted RBP16.84■□□□□ 0.29
SUDS3-203ENST00000541591 PLS1Q14651 629 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
SUDS3-203ENST00000541591 USP6NLQ92738 828 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 DDRGK1Q96HY6 314 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 CRISPLD2Q9H0B8 497 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 ARHGEF10LQ9HCE6 1279 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 FBXO28Q9NVF7 368 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 RPTORQ8N122 1335 aa16.84■□□□□ 0.29
SUDS3-203ENST00000541591 FLOT1O75955 427 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 NPLOC4Q8TAT6 608 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 APPBP2Q92624 585 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 GCC1Q96CN9 775 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 APBA2Q99767 749 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 HTATIP2Q9BUP3 242 aa16.83■□□□□ 0.28
SUDS3-203ENST00000541591 PRDM1O75626 825 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 APPP05067 770 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 CHMP4CQ96CF2 233 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
SUDS3-203ENST00000541591 FSD1Q9BTV5 496 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 MOV10L1Q9BXT6 1211 aaKnown RBP16.82■□□□□ 0.28
SUDS3-203ENST00000541591 VCPKMTQ9H867 229 aa16.82■□□□□ 0.28
SUDS3-203ENST00000541591 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
SUDS3-203ENST00000541591 RASA1P20936 1047 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 PTPREP23469 700 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 TDO2P48775 406 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 MNX1P50219 401 aaPredicted RBP16.81■□□□□ 0.28
SUDS3-203ENST00000541591 CCNA1P78396 465 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 COG2Q14746 738 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 MAP3K21Q5TCX8 1036 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 C7orf61Q8IZ16 206 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.81■□□□□ 0.28
SUDS3-203ENST00000541591 TMX2Q9Y320 296 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
SUDS3-203ENST00000541591 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 EVI5O60447 810 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 MX1P20591 662 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 DSG3P32926 999 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 CYP2C19P33261 490 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 FAM83BQ5T0W9 1011 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 ANKRD45Q5TZF3 282 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 SPATC1LQ9H0A9 340 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 IVNS1ABPQ9Y6Y0 642 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 LCTP09848 1927 aa16.8■□□□□ 0.28
SUDS3-203ENST00000541591 TTC41PQ6P2S7 1318 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 MYH6P13533 1939 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 SLC15A5A6NIM6 579 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
SUDS3-203ENST00000541591 ERCC3P19447 782 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 GRB14Q14449 540 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 ANO1Q5XXA6 986 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 NECAB2Q7Z6G3 386 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 NCAPG2Q86XI2 1143 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 CCDC17Q96LX7 622 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
SUDS3-203ENST00000541591 ZMYND8Q9ULU4 1186 aaPredicted RBP16.79■□□□□ 0.28
SUDS3-203ENST00000541591 LTBP2Q14767 1821 aa16.79■□□□□ 0.28
SUDS3-203ENST00000541591 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
SUDS3-203ENST00000541591 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
SUDS3-203ENST00000541591 SYN1P17600 705 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 ADORA2AP29274 412 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 CNGA1P29973 690 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 FXR1P51114 621 aaKnown RBP eCLIP16.78■□□□□ 0.28
SUDS3-203ENST00000541591 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 TRPV1Q8NER1 839 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 C11orf49Q9H6J7 331 aa16.78■□□□□ 0.28
SUDS3-203ENST00000541591 SH2D4AQ9H788 454 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms