RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 COG2Q14746 738 aa28.97■■■□□ 2.23
LEMD3-203ENST00000541171 NPLOC4Q8TAT6 608 aa28.97■■■□□ 2.23
LEMD3-203ENST00000541171 HOXC10Q9NYD6 342 aa28.97■■■□□ 2.23
LEMD3-203ENST00000541171 SWAP70Q9UH65 585 aa28.97■■■□□ 2.23
LEMD3-203ENST00000541171 COL6A1P12109 1028 aa28.96■■■□□ 2.23
LEMD3-203ENST00000541171 BMP8BP34820 402 aa28.96■■■□□ 2.23
LEMD3-203ENST00000541171 MAGEA10P43363 369 aaPredicted RBP28.96■■■□□ 2.23
LEMD3-203ENST00000541171 GRB14Q14449 540 aa28.96■■■□□ 2.23
LEMD3-203ENST00000541171 TMEM179Q6ZVK1 233 aa28.96■■■□□ 2.23
LEMD3-203ENST00000541171 CLEC10AQ8IUN9 316 aa28.96■■■□□ 2.23
LEMD3-203ENST00000541171 ATP5JP18859 108 aa28.95■■■□□ 2.22
LEMD3-203ENST00000541171 CYP2C19P33261 490 aa28.95■■■□□ 2.22
LEMD3-203ENST00000541171 KIAA1755Q5JYT7 1200 aa28.95■■■□□ 2.22
LEMD3-203ENST00000541171 MOV10L1Q9BXT6 1211 aaKnown RBP28.95■■■□□ 2.22
LEMD3-203ENST00000541171 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.95■■■□□ 2.225e-6■■■■■ 34.6
LEMD3-203ENST00000541171 CYP2D7A0A087X1C5 515 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 CHGBP05060 677 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 HOXC6P09630 235 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 AKR1B1P15121 316 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 LRRC26Q2I0M4 334 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 SAMD1Q6SPF0 538 aaPredicted RBP28.94■■■□□ 2.22
LEMD3-203ENST00000541171 DPP9Q86TI2 863 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 CHMP4BQ9H444 224 aaKnown RBP28.94■■■□□ 2.22
LEMD3-203ENST00000541171 ATP8A2Q9NTI2 1148 aa28.94■■■□□ 2.22
LEMD3-203ENST00000541171 SMIM22K7EJ46 135 aa28.93■■■□□ 2.22
LEMD3-203ENST00000541171 SPICE1Q8N0Z3 855 aa28.93■■■□□ 2.22
LEMD3-203ENST00000541171 HAUS7Q99871 368 aa28.93■■■□□ 2.22
LEMD3-203ENST00000541171 ARHGEF10LQ9HCE6 1279 aa28.93■■■□□ 2.22
LEMD3-203ENST00000541171 DDX20Q9UHI6 824 aaKnown RBP28.93■■■□□ 2.22
LEMD3-203ENST00000541171 ICA1Q05084 483 aa28.92■■■□□ 2.22
LEMD3-203ENST00000541171 PLS1Q14651 629 aa28.92■■■□□ 2.22
LEMD3-203ENST00000541171 SIAH1Q8IUQ4 282 aa28.92■■■□□ 2.22
LEMD3-203ENST00000541171 SENP6Q9GZR1 1112 aaPredicted RBP28.92■■■□□ 2.22
LEMD3-203ENST00000541171 SPATC1LQ9H0A9 340 aa28.92■■■□□ 2.22
LEMD3-203ENST00000541171 ADORA2AP29274 412 aa28.91■■■□□ 2.22
LEMD3-203ENST00000541171 AMOTL1Q8IY63 956 aa28.91■■■□□ 2.22
LEMD3-203ENST00000541171 UBE2OQ9C0C9 1292 aaKnown RBP28.91■■■□□ 2.22
LEMD3-203ENST00000541171 RCAN3Q9UKA8 241 aa28.91■■■□□ 2.22
LEMD3-203ENST00000541171 USP17L12C9JPN9 530 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 USP17L21D6R901 530 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 SMARCA5O60264 1052 aaPredicted RBP28.9■■■□□ 2.22
LEMD3-203ENST00000541171 FLOT1O75955 427 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 ERCC3P19447 782 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 DSG3P32926 999 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 CDK8P49336 464 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 C12orf60Q5U649 245 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 TRPV1Q8NER1 839 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 TMX2Q9Y320 296 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 SLC4A4Q9Y6R1 1079 aa28.9■■■□□ 2.22
LEMD3-203ENST00000541171 LPAR1Q92633 364 aa28.89■■■□□ 2.22
LEMD3-203ENST00000541171 ATG4CQ96DT6 458 aa28.89■■■□□ 2.22
LEMD3-203ENST00000541171 DDRGK1Q96HY6 314 aa28.89■■■□□ 2.22
LEMD3-203ENST00000541171 SH2D4AQ9H788 454 aa28.89■■■□□ 2.22
LEMD3-203ENST00000541171 STRNO43815 780 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 MSCO60682 206 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 UBE3CQ15386 1083 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 NCAPG2Q86XI2 1143 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 SHCBP1Q8NEM2 672 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 CCDC17Q96LX7 622 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 LRRCC1Q9C099 1032 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 VCPKMTQ9H867 229 aa28.88■■■□□ 2.21
LEMD3-203ENST00000541171 ATN1P54259 1190 aaPredicted RBP28.87■■■□□ 2.21
LEMD3-203ENST00000541171 MDM2Q00987 491 aaPredicted RBP28.87■■■□□ 2.21
LEMD3-203ENST00000541171 C20orf194Q5TEA3 1177 aa28.87■■■□□ 2.21
LEMD3-203ENST00000541171 TDHQ8IZJ6 230 aa28.87■■■□□ 2.21
LEMD3-203ENST00000541171 MB21D1Q8N884 522 aa28.87■■■□□ 2.21
LEMD3-203ENST00000541171 COBLO75128 1261 aa28.86■■■□□ 2.21
LEMD3-203ENST00000541171 CYBAP13498 195 aa28.86■■■□□ 2.21
LEMD3-203ENST00000541171 ZSCAN25Q6NSZ9 544 aa28.86■■■□□ 2.21
LEMD3-203ENST00000541171 PUS7LQ9H0K6 701 aaKnown RBP28.86■■■□□ 2.21
LEMD3-203ENST00000541171 BAZ2AQ9UIF9 1905 aaKnown RBP28.86■■■□□ 2.21
LEMD3-203ENST00000541171 RAD21O60216 631 aa28.85■■■□□ 2.21
LEMD3-203ENST00000541171 ANO1Q5XXA6 986 aa28.85■■■□□ 2.21
LEMD3-203ENST00000541171 OLFML2BQ68BL8 750 aa28.85■■■□□ 2.21
LEMD3-203ENST00000541171 C16orf86Q6ZW13 317 aa28.85■■■□□ 2.21
LEMD3-203ENST00000541171 MROH8Q9H579 483 aa28.85■■■□□ 2.21
LEMD3-203ENST00000541171 WDR46O15213 610 aaKnown RBP28.84■■■□□ 2.21
LEMD3-203ENST00000541171 IGHA2P01877 340 aa28.84■■■□□ 2.21
LEMD3-203ENST00000541171 EEF2P13639 858 aaKnown RBP28.84■■■□□ 2.21
LEMD3-203ENST00000541171 GJC2Q5T442 439 aaPredicted RBP28.84■■■□□ 2.21
LEMD3-203ENST00000541171 CTR9Q6PD62 1173 aa28.84■■■□□ 2.21
LEMD3-203ENST00000541171 SLC5A4Q9NY91 659 aa28.84■■■□□ 2.21
LEMD3-203ENST00000541171 LAMA3Q16787 3333 aa28.84■■■□□ 2.21
LEMD3-203ENST00000541171 MYH8P13535 1937 aa28.83■■■□□ 2.21
LEMD3-203ENST00000541171 MYCNP04198 464 aaPredicted RBP28.83■■■□□ 2.21
LEMD3-203ENST00000541171 LRIT3Q3SXY7 679 aa28.83■■■□□ 2.21
LEMD3-203ENST00000541171 FRMPD3Q5JV73 1810 aa28.83■■■□□ 2.21
LEMD3-203ENST00000541171 RLFQ13129 1914 aa28.82■■■□□ 2.2
LEMD3-203ENST00000541171 DNM1LO00429 736 aa28.82■■■□□ 2.2
LEMD3-203ENST00000541171 PRAMEF19Q5SWL8 479 aa28.82■■■□□ 2.2
LEMD3-203ENST00000541171 STK11IPQ8N1F8 1099 aa28.82■■■□□ 2.2
LEMD3-203ENST00000541171 KANSL2Q9H9L4 492 aa28.82■■■□□ 2.2
LEMD3-203ENST00000541171 TMEM132BQ14DG7 1078 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 Q7L0L9 218 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 DEFB123Q8N688 67 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 ARRDC4Q8NCT1 418 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 SLC17A8Q8NDX2 589 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 FBXO28Q9NVF7 368 aa28.81■■■□□ 2.2
LEMD3-203ENST00000541171 FCER1AP12319 257 aa28.8■■■□□ 2.2
LEMD3-203ENST00000541171 ECHDC1Q9NTX5 307 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms