RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 CCDC178Q5BJE1 867 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 FAM47AQ5JRC9 791 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.71□□□□□ -0.53
MRE11-210ENST00000541157 ZFPM1Q8IX07 1006 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 NSUN7Q8NE18 718 aaKnown RBP11.71□□□□□ -0.53
MRE11-210ENST00000541157 SMARCC2Q8TAQ2 1214 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 MYOZ2Q9NPC6 264 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 TCP11L1Q9NUJ3 509 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.53
MRE11-210ENST00000541157 PLIN4Q96Q06 1357 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 SHTN1A0MZ66 631 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 JAK2O60674 1132 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 CTDNEP1O95476 244 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
MRE11-210ENST00000541157 TCP10Q12799 353 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 PKP1Q13835 747 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 ZNF654Q8IZM8 581 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 ZNF444Q8N0Y2 327 aaPredicted RBP11.7□□□□□ -0.54
MRE11-210ENST00000541157 ANKS1AQ92625 1134 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 ZDHHC9Q9Y397 364 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
MRE11-210ENST00000541157 CNTNAP1P78357 1384 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 CLRN2A0PK11 232 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 DDTLA6NHG4 134 aaPredicted RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 GOLGA8AA7E2F4 631 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 BHMG1C9JSJ3 638 aaPredicted RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 MYO1BO43795 1136 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 NMT2O60551 498 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 BRD1O95696 1058 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 PDCP20941 246 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 SYT1P21579 422 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 SHMT1P34896 483 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 MICU3Q86XE3 530 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 GPC2Q8N158 579 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 NEDD1Q8NHV4 660 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
MRE11-210ENST00000541157 PI4KBQ9UBF8 816 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 SBF1O95248 1867 aa11.69□□□□□ -0.54
MRE11-210ENST00000541157 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 TCP10L2B9ZVM9 353 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 WNT10BO00744 389 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 CPLX1O14810 134 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 DTNBO60941 627 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 CDKL5O76039 1030 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 DDAH1O94760 285 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 RXRAP19793 462 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 CATIPQ7Z7H3 387 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 FAM83AQ86UY5 434 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 METTL16Q86W50 562 aaKnown RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 FOXP4Q8IVH2 680 aaPredicted RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
MRE11-210ENST00000541157 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
MRE11-210ENST00000541157 IGKV6D-41A0A0C4DH26 115 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 GPR37O15354 613 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 STX6O43752 255 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 EGFRP00533 1210 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CALM1P0DP23 149 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CALM2P0DP24 149 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CALM3P0DP25 149 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CDC27P30260 824 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 NOVP48745 357 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 TROAPQ12815 778 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 PPP2R5BQ15173 497 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 RTN1Q16799 776 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 NBPF9Q3BBW0 867 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
MRE11-210ENST00000541157 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CRACR2BQ8N4Y2 399 aaPredicted RBP11.67□□□□□ -0.54
MRE11-210ENST00000541157 FANCBQ8NB91 859 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 DDX11Q96FC9 970 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 DNAJC18Q9H819 358 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 VEZTQ9HBM0 779 aa11.67□□□□□ -0.54
MRE11-210ENST00000541157 KIF3AQ9Y496 699 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms