RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MAP2K7O14733 419 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 KLK7P49862 253 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 PUM3Q15397 648 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 CDKAL1Q5VV42 579 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 PIK3AP1Q6ZUJ8 805 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 SMIM5Q71RC9 77 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 PANX2Q96RD6 677 aa11.74□□□□□ -0.53
CDC42SE1-207ENST00000540998 ADAMTSL3P82987 1691 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 CTAGE9A4FU28 777 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 GOLGA6L9A6NEM1 432 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 TPM1P09493 284 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 CYP7A1P22680 504 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 PMS1P54277 932 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 PPARAQ07869 468 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 TXLNBQ8N3L3 684 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 DACH1Q9UI36 760 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 CHD4Q14839 1912 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 STK36Q9NRP7 1315 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 KRT9P35527 623 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 GYG1P46976 350 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 FAM193AP78312 1265 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 ABHD10Q9NUJ1 306 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 DUSP10Q9Y6W6 482 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 LMTK3Q96Q04 1460 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 ATRNO75882 1429 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 MYH6P13533 1939 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 ZNF185O15231 689 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 EVA1CP58658 441 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 PPARDQ03181 441 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 CASP8Q14790 479 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 RASGRP2Q7LDG7 609 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 LPIN2Q92539 896 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 PLA2G12BQ9BX93 195 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
CDC42SE1-207ENST00000540998 MYO1CO00159 1063 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 FGFR2P21802 821 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 DHX8Q14562 1220 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 SART3Q15020 963 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 NPY5RQ15761 445 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 KRT23Q9C075 422 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 BAZ2AQ9UIF9 1905 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 SLC51AQ86UW1 340 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 STAG1Q8WVM7 1258 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 WASF1Q92558 559 aa11.72□□□□□ -0.53
CDC42SE1-207ENST00000540998 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 KRT2P35908 639 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 UBXN1Q04323 297 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 TTC38Q5R3I4 469 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 SUSD4Q5VX71 490 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 NELFBQ8WX92 580 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 GPKOWQ92917 476 aaPredicted RBP eCLIP11.71□□□□□ -0.535e-8■■□□□ 14
CDC42SE1-207ENST00000540998 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 COL4A1P02462 1669 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 RCCD1A6NED2 376 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 MYBL2P10244 700 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 COPB1P53618 953 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 SEC23AQ15436 765 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 PSMB7Q99436 277 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 NAPGQ99747 312 aaPredicted RBP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 AATFQ9NY61 560 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 SMARCAL1Q9NZC9 954 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 RSPH14Q9UHP6 348 aa11.71□□□□□ -0.53
CDC42SE1-207ENST00000540998 UBR2Q8IWV8 1755 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 SLIT2O94813 1529 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 TTC26A0AVF1 554 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CTAGE15A4D2H0 777 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 KCNJ18B7U540 433 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 PDE8AO60658 829 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 STARD3NLO95772 234 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CTAGE8P0CG41 777 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CYP2D6P10635 497 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 SLC5A1P13866 664 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 PRCPP42785 496 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CYP27A1Q02318 531 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 GPS2Q13227 327 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 KCNJ12Q14500 433 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CTAGE6Q86UF2 777 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CTAGE4Q8IX94 777 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 SMCR8Q8TEV9 937 aaPredicted RBP11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 DRC1Q96MC2 740 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.54
CDC42SE1-207ENST00000540998 UQCRFS1P1P0C7P4 283 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 FUT2Q10981 343 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 BRD3Q15059 726 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 ALX1Q15699 326 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 FILIP1LQ4L180 1135 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 HDXQ7Z353 690 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
CDC42SE1-207ENST00000540998 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms