RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PTCH2Q9Y6C5 1203 aa20.09■□□□□ 0.81
CD9-209ENST00000540891 FMNL1O95466 1100 aaPredicted RBP20.08■□□□□ 0.81
CD9-209ENST00000540891 FCGRTP55899 365 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 ATP2B2Q01814 1243 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 FAM47AQ5JRC9 791 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 SPICE1Q8N0Z3 855 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 LPAR1Q92633 364 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 SH2D4AQ9H788 454 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 NYAP2Q9P242 653 aa20.08■□□□□ 0.81
CD9-209ENST00000540891 CHMLP26374 656 aa20.07■□□□□ 0.8
CD9-209ENST00000540891 TFAP4Q01664 338 aa20.07■□□□□ 0.8
CD9-209ENST00000540891 CEP95Q96GE4 821 aa20.07■□□□□ 0.8
CD9-209ENST00000540891 SRRDQ9UH36 339 aa20.07■□□□□ 0.8
CD9-209ENST00000540891 MGAMO43451 1857 aa20.07■□□□□ 0.8
CD9-209ENST00000540891 SPDYE16A6NNV3 312 aaPredicted RBP20.06■□□□□ 0.8
CD9-209ENST00000540891 CNMDO75829 334 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 TSPY3P0CV98 308 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 TSPY8P0CW00 308 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 PRMT2P55345 433 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 HAND2P61296 217 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 Q3C1V9 767 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 LBX2Q6XYB7 198 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 GTF3C2Q8WUA4 911 aaPredicted RBP20.06■□□□□ 0.8
CD9-209ENST00000540891 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 DSCC1Q9BVC3 393 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 MTMR4Q9NYA4 1195 aa20.06■□□□□ 0.8
CD9-209ENST00000540891 ORC4O43929 436 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 PRKCZQ05513 592 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 TBC1D10CQ8IV04 446 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 NKX2-3Q8TAU0 364 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 GABRQQ9UN88 632 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 RLFQ13129 1914 aa20.05■□□□□ 0.8
CD9-209ENST00000540891 MYPNQ86TC9 1320 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 RAD50Q92878 1312 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 WDR46O15213 610 aaKnown RBP20.04■□□□□ 0.8
CD9-209ENST00000540891 NEFLP07196 543 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 ERVK-9P63128 1117 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 ERVK-24P63145 666 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 GPRC5AQ8NFJ5 357 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 MKL1Q969V6 931 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 ARMC5Q96C12 935 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 PAGR1Q9BTK6 254 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 IL17RBQ9NRM6 502 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 CLIP2Q9UDT6 1046 aa20.04■□□□□ 0.8
CD9-209ENST00000540891 F5H6K3 240 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 TNPO2O14787 897 aaKnown RBP20.03■□□□□ 0.8
CD9-209ENST00000540891 TTLL1O95922 423 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 HOXD10P28358 340 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 KLRC3Q07444 240 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 COG2Q14746 738 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 STAG1Q8WVM7 1258 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 GOPCQ9HD26 462 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 BTBD7Q9P203 1132 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 RABGAP1Q9Y3P9 1069 aa20.03■□□□□ 0.8
CD9-209ENST00000540891 A0A0G2JMZ2 1700 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 TSPY2A6NKD2 308 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 NMT2O60551 498 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 NDUFB10O96000 172 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 CENPBP07199 599 aaPredicted RBP20.02■□□□□ 0.8
CD9-209ENST00000540891 DSG3P32926 999 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 NOVP48745 357 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 AKNAD1Q5T1N1 836 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 LRRC47Q8N1G4 583 aaKnown RBP20.02■□□□□ 0.8
CD9-209ENST00000540891 PORCNQ9H237 461 aa20.02■□□□□ 0.8
CD9-209ENST00000540891 LAMA4Q16363 1823 aa20.02■□□□□ 0.79
CD9-209ENST00000540891 SGSM2O43147 1006 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 RANBP6O60518 1105 aaKnown RBP20.01■□□□□ 0.79
CD9-209ENST00000540891 FLT3LGP49771 235 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 FAM83BQ5T0W9 1011 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 NUP88Q99567 741 aaPredicted RBP20.01■□□□□ 0.79
CD9-209ENST00000540891 FBXO28Q9NVF7 368 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 HOXC10Q9NYD6 342 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 SYNPO2Q9UMS6 1093 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 PARP14Q460N5 1801 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 NEDD4P46934 1319 aa20.01■□□□□ 0.79
CD9-209ENST00000540891 MYH4Q9Y623 1939 aa20■□□□□ 0.79
CD9-209ENST00000540891 CENPFP49454 3210 aa20■□□□□ 0.79
CD9-209ENST00000540891 ZNF213O14771 459 aa20■□□□□ 0.79
CD9-209ENST00000540891 RAD21O60216 631 aa20■□□□□ 0.79
CD9-209ENST00000540891 FLOT1O75955 427 aa20■□□□□ 0.79
CD9-209ENST00000540891 PCP11498 1178 aaKnown RBP20■□□□□ 0.79
CD9-209ENST00000540891 SOX10P56693 466 aa20■□□□□ 0.79
CD9-209ENST00000540891 PTH1RQ03431 593 aa20■□□□□ 0.79
CD9-209ENST00000540891 SLC9C1Q4G0N8 1177 aa20■□□□□ 0.79
CD9-209ENST00000540891 BMP2KLQ5H9B9 411 aa20■□□□□ 0.79
CD9-209ENST00000540891 RRP12Q5JTH9 1297 aaKnown RBP20■□□□□ 0.79
CD9-209ENST00000540891 GMCL1P1Q8NEA9 526 aa20■□□□□ 0.79
CD9-209ENST00000540891 RAET1EQ8TD07 263 aa20■□□□□ 0.79
CD9-209ENST00000540891 SH3TC2Q8TF17 1288 aa20■□□□□ 0.79
CD9-209ENST00000540891 RUFY2Q8WXA3 655 aa20■□□□□ 0.79
CD9-209ENST00000540891 COA7Q96BR5 231 aa20■□□□□ 0.79
CD9-209ENST00000540891 ATG4CQ96DT6 458 aa20■□□□□ 0.79
CD9-209ENST00000540891 ZNF333Q96JL9 665 aa20■□□□□ 0.79
CD9-209ENST00000540891 GJD2Q9UKL4 321 aa20■□□□□ 0.79
CD9-209ENST00000540891 DOCK3Q8IZD9 2030 aa19.99■□□□□ 0.79
CD9-209ENST00000540891 IRF5Q13568 498 aa19.99■□□□□ 0.79
CD9-209ENST00000540891 MFSD6Q6ZSS7 791 aa19.99■□□□□ 0.79
CD9-209ENST00000540891 TOMM22Q9NS69 142 aa19.99■□□□□ 0.79
CD9-209ENST00000540891 ADAMTS5Q9UNA0 930 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms