RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TYRO3Q06418 890 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 STK38Q15208 465 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 RTN1Q16799 776 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 LINC00301Q8NCQ3 95 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 RPGRQ92834 1020 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 RRAGDQ9NQL2 400 aaPredicted RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 NOL7Q9UMY1 257 aaKnown RBP11.75□□□□□ -0.53
LMO3-224ENST00000540848 DLEC1Q9Y238 1755 aa11.75□□□□□ -0.53
LMO3-224ENST00000540848 FAM187AA6NFU0 413 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 DEXIO95424 95 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 TPM3P06753 285 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 LDHCP07864 332 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 U2AF2P26368 475 aaKnown RBP eCLIP11.74□□□□□ -0.53
LMO3-224ENST00000540848 ME1P48163 572 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 USP46P62068 366 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 MECOMQ03112 1051 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
LMO3-224ENST00000540848 SF3A1Q15459 793 aaKnown RBP11.74□□□□□ -0.53
LMO3-224ENST00000540848 ADGRA1Q86SQ6 560 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
LMO3-224ENST00000540848 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
LMO3-224ENST00000540848 QTRT2Q9H974 415 aaKnown RBP11.74□□□□□ -0.53
LMO3-224ENST00000540848 TOMM22Q9NS69 142 aa11.74□□□□□ -0.53
LMO3-224ENST00000540848 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
LMO3-224ENST00000540848 SPTLC2O15270 562 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 PPP6R2O75170 966 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 BBOX1O75936 387 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 DXOO77932 396 aaKnown RBP11.73□□□□□ -0.53
LMO3-224ENST00000540848 XBP1P17861 261 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 CDC27P30260 824 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 GUCY1B3Q02153 619 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
LMO3-224ENST00000540848 CCDC178Q5BJE1 867 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 RRP12Q5JTH9 1297 aaKnown RBP11.73□□□□□ -0.53
LMO3-224ENST00000540848 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 KRT40Q6A162 431 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 PRR5LQ6MZQ0 368 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 TDRD7Q8NHU6 1098 aaKnown RBP11.73□□□□□ -0.53
LMO3-224ENST00000540848 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
LMO3-224ENST00000540848 ANKIB1Q9P2G1 1089 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 USP25Q9UHP3 1055 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
LMO3-224ENST00000540848 MINDY4BA8MYZ0 360 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 DDAH1O94760 285 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 GYS1P13807 737 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 PDE4BQ07343 736 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 SEC23AQ15436 765 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 CATIPQ7Z7H3 387 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 DZIP1Q86YF9 867 aaKnown RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 AMOTL1Q8IY63 956 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 FANCBQ8NB91 859 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 ENGASEQ8NFI3 743 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 SDR42E1Q8WUS8 393 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 NOL10Q9BSC4 688 aaKnown RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 MRVI1Q9Y6F6 885 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
LMO3-224ENST00000540848 TNKSO95271 1327 aa11.72□□□□□ -0.53
LMO3-224ENST00000540848 KLRG2A4D1S0 409 aaPredicted RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 BAG3O95817 575 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 PTMAP06454 111 aaKnown RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 LDHBP07195 334 aaKnown RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 SLC39A14Q15043 492 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 STX1AQ16623 288 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 ZNF787Q6DD87 383 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 AMIGO3Q86WK7 504 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 FSIP1Q8NA03 581 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.53
LMO3-224ENST00000540848 TOR4AQ9NXH8 423 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.53
LMO3-224ENST00000540848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
LMO3-224ENST00000540848 GOLGA6L6A8MZA4 724 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 ZNF500O60304 480 aaPredicted RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 SERPINB2P05120 415 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 CMA1P23946 247 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 KLRK1P26718 216 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 CEBPZQ03701 1054 aaKnown RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 SNW1Q13573 536 aaKnown RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 CAMK4Q16566 473 aa11.71□□□□□ -0.54
LMO3-224ENST00000540848 IFIT1BQ5T764 474 aaKnown RBP11.71□□□□□ -0.54
LMO3-224ENST00000540848 ZNF384Q8TF68 577 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms