RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ASCC2Q9H1I8 757 aaPredicted RBP6.3□□□□□ -1.4
MDM2-227ENST00000540709 ADAMTS10Q9H324 1103 aa6.3□□□□□ -1.4
MDM2-227ENST00000540709 RAC2P15153 192 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 YBX3P16989 372 aaKnown RBP eCLIP6.29□□□□□ -1.44e-6■□□□□ 8.3
MDM2-227ENST00000540709 POLR2BP30876 1174 aaKnown RBP6.29□□□□□ -1.4
MDM2-227ENST00000540709 GDNFP39905 211 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 CLCQ05315 142 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 TMEM67Q5HYA8 995 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 KIAA0825Q8IV33 1275 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 TMEM40Q8WWA1 233 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 CCDC120Q96HB5 630 aa6.29□□□□□ -1.4
MDM2-227ENST00000540709 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 RGS13O14921 159 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
MDM2-227ENST00000540709 ZNF165P49910 485 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 ERVFC1P60507 584 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 ZNF124Q15973 351 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 FBXW10Q5XX13 1052 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 OVOS1Q6IE37 1185 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 USP48Q86UV5 1035 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 TSPYL5Q86VY4 417 aaPredicted RBP6.28□□□□□ -1.4
MDM2-227ENST00000540709 ANTXR1Q9H6X2 564 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 C19orf73Q9NVV2 129 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 GMIPQ9P107 970 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 PCDHGB7Q9Y5F8 929 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 PCDHA11Q9Y5I1 949 aa6.28□□□□□ -1.4
MDM2-227ENST00000540709 SHISA3A0PJX4 238 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 C8AP07357 584 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 ZNF394Q53GI3 561 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 KSR1Q8IVT5 923 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 POU5F2Q8N7G0 328 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 ABHD4Q8TB40 342 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
MDM2-227ENST00000540709 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
MDM2-227ENST00000540709 ASPNQ9BXN1 380 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 LRRC3Q9BY71 257 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 KCNQ5Q9NR82 932 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 TMEM59LQ9UK28 342 aa6.27□□□□□ -1.41
MDM2-227ENST00000540709 ZNF503-AS2A6NEH8 195 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 UBOX5O94941 541 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 GLI1P08151 1106 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
MDM2-227ENST00000540709 TRIM26Q12899 539 aaPredicted RBP6.26□□□□□ -1.41
MDM2-227ENST00000540709 GAB4Q2WGN9 574 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 LDLRAD1Q5T700 205 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 MYLIPQ8WY64 445 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 RNF34Q969K3 372 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 ATG4CQ96DT6 458 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 DIRC2Q96SL1 478 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 SLC38A3Q99624 504 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 FAM53CQ9NYF3 392 aa6.26□□□□□ -1.41
MDM2-227ENST00000540709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
MDM2-227ENST00000540709 SSU72P8A0A1W2PR75 194 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 CLEC3AO75596 197 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 ATE1O95260 518 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 SRFP11831 508 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 RNF4P78317 190 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 NMIQ13287 307 aaPredicted RBP6.25□□□□□ -1.41
MDM2-227ENST00000540709 PKN1Q16512 942 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 PRR23BQ6ZRT6 265 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 FERD3LQ96RJ6 166 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 NT5C1AQ9BXI3 368 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.25□□□□□ -1.41
MDM2-227ENST00000540709 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 EHMT1Q9H9B1 1298 aa6.25□□□□□ -1.41
MDM2-227ENST00000540709 RPL10P27635 214 aaKnown RBP6.24□□□□□ -1.41
MDM2-227ENST00000540709 FANCCQ00597 558 aa6.24□□□□□ -1.41
MDM2-227ENST00000540709 REXO1Q8N1G1 1221 aaKnown RBP6.24□□□□□ -1.41
MDM2-227ENST00000540709 MKRN2Q9H000 416 aaKnown RBP6.24□□□□□ -1.41
MDM2-227ENST00000540709 CNNM2Q9H8M5 875 aa6.24□□□□□ -1.41
MDM2-227ENST00000540709 RBM47A0AV96 593 aaKnown RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 MEIS1O00470 390 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 SNW1Q13573 536 aaKnown RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 LRRFIP1Q32MZ4 808 aaKnown RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 NBPF12Q5TAG4 269 aaPredicted RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 CDCP2Q5VXM1 449 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 TMC3Q7Z5M5 1100 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 SLITRK4Q8IW52 837 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 NSUN3Q9H649 340 aaKnown RBP6.23□□□□□ -1.41
MDM2-227ENST00000540709 KCNK12Q9HB15 430 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 ZMYM5Q9UJ78 669 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 FBXL21Q9UKT6 434 aa6.23□□□□□ -1.41
MDM2-227ENST00000540709 FKTNO75072 461 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 NME1P15531 152 aaKnown RBP6.22□□□□□ -1.41
MDM2-227ENST00000540709 NBPF9Q3BBW0 867 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 C9orf131Q5VYM1 1079 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 OXR1Q8N573 874 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 VWCEQ96DN2 955 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 FAM84AQ96KN4 292 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 FOXP3Q9BZS1 431 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
MDM2-227ENST00000540709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.21□□□□□ -1.42
MDM2-227ENST00000540709 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
MDM2-227ENST00000540709 RAD51AP2Q09MP3 1159 aa6.21□□□□□ -1.42
MDM2-227ENST00000540709 SYDE1Q6ZW31 735 aaPredicted RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms