RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 FAM237AA0A1B0GTK4 181 aa17.06■□□□□ 0.32
TSFM-207ENST00000540550 CALML3P27482 149 aa17.06■□□□□ 0.32
TSFM-207ENST00000540550 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
TSFM-207ENST00000540550 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
TSFM-207ENST00000540550 FAM13BQ9NYF5 915 aa17.06■□□□□ 0.32
TSFM-207ENST00000540550 MAD2L2Q9UI95 211 aa17.06■□□□□ 0.32
TSFM-207ENST00000540550 GOLGA6L19H0YKK7 550 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 BMP15O95972 392 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
TSFM-207ENST00000540550 FKBP1AP62942 108 aaKnown RBP17.05■□□□□ 0.32
TSFM-207ENST00000540550 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 STAG2Q8N3U4 1231 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
TSFM-207ENST00000540550 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 ZNF646O15015 1829 aaPredicted RBP17.04■□□□□ 0.32
TSFM-207ENST00000540550 CLCN1P35523 988 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 CRKP46108 304 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 CC2D2BQ6DHV5 1058 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
TSFM-207ENST00000540550 SUPT20HQ8NEM7 779 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 FBXO2Q9UK22 296 aaPredicted RBP17.04■□□□□ 0.32
TSFM-207ENST00000540550 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 FAM205CA6NFA0 338 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 PTPREP23469 700 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 ERCC4Q92889 916 aaPredicted RBP17.04■□□□□ 0.32
TSFM-207ENST00000540550 CEP95Q96GE4 821 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 DDX4Q9NQI0 724 aaKnown RBP17.04■□□□□ 0.32
TSFM-207ENST00000540550 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
TSFM-207ENST00000540550 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
TSFM-207ENST00000540550 TNFRSF25Q93038 417 aa17.03■□□□□ 0.32
TSFM-207ENST00000540550 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
TSFM-207ENST00000540550 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
TSFM-207ENST00000540550 SRPRBQ9Y5M8 271 aaKnown RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
TSFM-207ENST00000540550 BECN2A8MW95 431 aa17.02■□□□□ 0.32
TSFM-207ENST00000540550 NPY5RQ15761 445 aa17.02■□□□□ 0.32
TSFM-207ENST00000540550 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
TSFM-207ENST00000540550 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
TSFM-207ENST00000540550 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
TSFM-207ENST00000540550 GPKOWQ92917 476 aaPredicted RBP eCLIP17.02■□□□□ 0.32
TSFM-207ENST00000540550 KCNQ5Q9NR82 932 aa17.02■□□□□ 0.32
TSFM-207ENST00000540550 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.32
TSFM-207ENST00000540550 MYO3BQ8WXR4 1341 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 KLRF2D3W0D1 207 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 AP5Z1O43299 807 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 RBM5P52756 815 aaKnown RBP eCLIP17.02■□□□□ 0.31
TSFM-207ENST00000540550 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.31
TSFM-207ENST00000540550 GABPAQ06546 454 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 AOC3Q16853 763 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 EARS2Q5JPH6 523 aaKnown RBP17.02■□□□□ 0.31
TSFM-207ENST00000540550 TTC38Q5R3I4 469 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 DACT2Q5SW24 774 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 MRIQ9BWK5 157 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 ZKSCAN5Q9Y2L8 839 aa17.02■□□□□ 0.31
TSFM-207ENST00000540550 GOLGA6L6A8MZA4 724 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 GOLGA8HP0CJ92 632 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 IQCB1Q15051 598 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 BLIDQ8IZY5 108 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 CNNM3Q8NE01 707 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 C7orf43Q8WVR3 580 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 SPZ1Q9BXG8 430 aa17.01■□□□□ 0.31
TSFM-207ENST00000540550 NLRP12P59046 1061 aa17■□□□□ 0.31
TSFM-207ENST00000540550 KIAA2012Q0VF49 1180 aa17■□□□□ 0.31
TSFM-207ENST00000540550 SPECC1Q5M775 1068 aa17■□□□□ 0.31
TSFM-207ENST00000540550 KRBA2Q6ZNG9 492 aa17■□□□□ 0.31
TSFM-207ENST00000540550 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
TSFM-207ENST00000540550 C10orf71Q711Q0 1435 aa17■□□□□ 0.31
TSFM-207ENST00000540550 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
TSFM-207ENST00000540550 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
TSFM-207ENST00000540550 FERMT2Q96AC1 680 aa17■□□□□ 0.31
TSFM-207ENST00000540550 TRIM5Q9C035 493 aa17■□□□□ 0.31
TSFM-207ENST00000540550 PCDHA4Q9UN74 947 aa17■□□□□ 0.31
TSFM-207ENST00000540550 A0A087WWV3 80 aa17■□□□□ 0.31
TSFM-207ENST00000540550 AKR1B1P15121 316 aa17■□□□□ 0.31
TSFM-207ENST00000540550 NOVP48745 357 aa17■□□□□ 0.31
TSFM-207ENST00000540550 ZNF174Q15697 407 aa17■□□□□ 0.31
TSFM-207ENST00000540550 GALNT17Q6IS24 598 aa17■□□□□ 0.31
TSFM-207ENST00000540550 MYH4Q9Y623 1939 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 BIN1O00499 593 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 VEGFAP15692 232 aaPredicted RBP16.99■□□□□ 0.31
TSFM-207ENST00000540550 GRIN1Q05586 938 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 GRIPAP1Q4V328 841 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 CCDC12Q8WUD4 166 aaPredicted RBP16.99■□□□□ 0.31
TSFM-207ENST00000540550 RRP36Q96EU6 259 aaKnown RBP16.99■□□□□ 0.31
TSFM-207ENST00000540550 CSRNP2Q9H175 543 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 MTMR4Q9NYA4 1195 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
TSFM-207ENST00000540550 PSME4Q14997 1843 aa16.99■□□□□ 0.31
TSFM-207ENST00000540550 CYTH3O43739 400 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms