RNA–Protein interactions for RNA: ENST00000540476.5

MDM1-211, Transcript of Mdm1 nuclear protein, humanhuman

TSL 4

Gene MDM1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-211ENST00000540476 POLR3DP05423 398 aaPredicted RBP11.75□□□□□ -0.53
MDM1-211ENST00000540476 SNX17Q15036 470 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 TRIM60Q495X7 471 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 ABRAQ8N0Z2 381 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 MIGA1Q8NAN2 632 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 BADQ92934 168 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 SPATC1LQ9H0A9 340 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 NRBP1Q9UHY1 535 aa11.75□□□□□ -0.53
MDM1-211ENST00000540476 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 RARBP10826 455 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 ERCC3P19447 782 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 ADCYAP1R1P41586 468 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 PLS1Q14651 629 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 C9orf50Q5SZB4 431 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 RNF180Q86T96 592 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 TRPV1Q8NER1 839 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 ACER1Q8TDN7 264 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 MYLIPQ8WY64 445 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 RNPC3Q96LT9 517 aaKnown RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
MDM1-211ENST00000540476 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
MDM1-211ENST00000540476 IGHA2P01877 340 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 FCER1AP12319 257 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 TRIM27P14373 513 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 RAG1P15918 1043 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 LRRC41Q15345 812 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 NCAPG2Q86XI2 1143 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 FERMT2Q96AC1 680 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
MDM1-211ENST00000540476 SLC25A27O95847 323 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 CLTBP09497 229 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 SHMT1P34896 483 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 TLE2Q04725 743 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 SEPT2Q15019 361 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
MDM1-211ENST00000540476 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
MDM1-211ENST00000540476 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 XPNPEP3Q9NQH7 507 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 PHF24Q9UPV7 400 aa11.72□□□□□ -0.53
MDM1-211ENST00000540476 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 TRIM43BA6NCK2 446 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 COBLO75128 1261 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 FLOT1O75955 427 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 PLCD1P51178 756 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 ATP8B2P98198 1209 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 FPGSQ05932 587 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 KCTD2Q14681 263 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 FAM47AQ5JRC9 791 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 CCDC174Q6PII3 467 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 TRIM43Q96BQ3 446 aaPredicted RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 CCDC8Q9H0W5 538 aaPredicted RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 MCM9Q9NXL9 1143 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
MDM1-211ENST00000540476 DBNLQ9UJU6 430 aaKnown RBP11.71□□□□□ -0.53
MDM1-211ENST00000540476 LAMA2P24043 3122 aaKnown RBP11.71□□□□□ -0.54
MDM1-211ENST00000540476 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 MAST2Q6P0Q8 1798 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 MAGEB6P1A0A0J9YX57 407 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 DCDC2CA8MYV0 355 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 KIAA0355O15063 1070 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 COPB2P35606 906 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 ERC1Q8IUD2 1116 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 NUP133Q8WUM0 1156 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
MDM1-211ENST00000540476 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
MDM1-211ENST00000540476 DNAH12Q6ZR08 3092 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 VCANP13611 3396 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
MDM1-211ENST00000540476 PQBP1O60828 265 aaKnown RBP11.69□□□□□ -0.54
MDM1-211ENST00000540476 BCAR3O75815 825 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 AKR1A1P14550 325 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 GUCY1A2P33402 732 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 GABPAQ06546 454 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 PRAMEF19Q5SWL8 479 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 ZKSCAN2Q63HK3 967 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 TOX2Q96NM4 488 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 MMP19Q99542 508 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
MDM1-211ENST00000540476 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
MDM1-211ENST00000540476 TSEN34Q9BSV6 310 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms