RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 HOXC10Q9NYD6 342 aa15.76■□□□□ 0.11
SEMA4D-223ENST00000540475 BTBD7Q9P203 1132 aa15.76■□□□□ 0.11
SEMA4D-223ENST00000540475 ARPP21Q9UBL0 812 aaPredicted RBP15.76■□□□□ 0.11
SEMA4D-223ENST00000540475 DNAH12Q6ZR08 3092 aa15.76■□□□□ 0.11
SEMA4D-223ENST00000540475 COL11A1P12107 1806 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 MPHOSPH10O00566 681 aaKnown RBP15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 RNF113AO15541 343 aaKnown RBP15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 FARP2O94887 1054 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 HOXC6P09630 235 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 TRIM32Q13049 653 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 AMOTL1Q8IY63 956 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 PAGR1Q9BTK6 254 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 HTATIP2Q9BUP3 242 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 FRMPD3Q5JV73 1810 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
SEMA4D-223ENST00000540475 H0YGN5 161 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 TFRCP02786 760 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 PTPREP23469 700 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 RGS2P41220 211 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 MNX1P50219 401 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 MAP2K5Q13163 448 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 HABP4Q5JVS0 413 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 SH2D4AQ9H788 454 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 ARHGEF10LQ9HCE6 1279 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 OGDHLQ9ULD0 1010 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 ADAMTS5Q9UNA0 930 aa15.74■□□□□ 0.11
SEMA4D-223ENST00000540475 SZT2Q5T011 3432 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 MYH4Q9Y623 1939 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 SLC15A5A6NIM6 579 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 GNAT2P19087 354 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 DSG3P32926 999 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 ICA1Q05084 483 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 GRB14Q14449 540 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 TSHZ3Q63HK5 1081 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 APBA2Q99767 749 aa15.73■□□□□ 0.11
SEMA4D-223ENST00000540475 ERC2O15083 957 aa15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 WDR46O15213 610 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 GPAA1O43292 621 aa15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 PRKAR2AP13861 404 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 CACNB2Q08289 660 aaPredicted RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 HDAC1Q13547 482 aaPredicted RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 LRRFIP1Q32MZ4 808 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 CCAR1Q8IX12 1150 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 MB21D1Q8N884 522 aa15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 SHCBP1Q8NEM2 672 aa15.72■□□□□ 0.11
SEMA4D-223ENST00000540475 PATL2C9JE40 543 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 STRNO43815 780 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 EEF2P13639 858 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 RASA1P20936 1047 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 AAMPQ13685 434 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 CCL14Q16627 93 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 LHX8Q68G74 356 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 NECAB2Q7Z6G3 386 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 CLEC10AQ8IUN9 316 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 OTUD7AQ8TE49 926 aaPredicted RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 DPF3Q92784 378 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 PAWRQ96IZ0 340 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 MOV10L1Q9BXT6 1211 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 SPATC1LQ9H0A9 340 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 PRO3102Q9H379 93 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 EPB41L4AQ9HCS5 686 aaPredicted RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 COLQQ9Y215 455 aaPredicted RBP15.71■□□□□ 0.11
SEMA4D-223ENST00000540475 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 M0R2C6 588 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 MX1P20591 662 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 TICAM2Q86XR7 235 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 CRBNQ96SW2 442 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 TANGO6Q9C0B7 1094 aa15.7■□□□□ 0.1
SEMA4D-223ENST00000540475 ZMYM1Q5SVZ6 1142 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 IFNL3Q8IZI9 196 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 ABRAQ8N0Z2 381 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 MKL1Q969V6 931 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 MROH8Q9H579 483 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 FLRT1Q9NZU1 646 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 PCDH10Q9P2E7 1040 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 NR2E3Q9Y5X4 410 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
SEMA4D-223ENST00000540475 FLOT1O75955 427 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 COL6A1P12109 1028 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 CCND3P30281 292 aaPredicted RBP15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 SPICE1Q8N0Z3 855 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 NPLOC4Q8TAT6 608 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 DIS3LQ8TF46 1054 aaKnown RBP15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 SEC62Q99442 399 aaKnown RBP15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 NBPF3Q9H094 633 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 GOPCQ9HD26 462 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 SYNPO2Q9UMS6 1093 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 IVNS1ABPQ9Y6Y0 642 aa15.68■□□□□ 0.1
SEMA4D-223ENST00000540475 MINDY4BA8MYZ0 360 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 ERCC3P19447 782 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 TMEM132BQ14DG7 1078 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 OLFML2BQ68BL8 750 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms