RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 WTAPQ15007 396 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 HLFQ16534 295 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 SMYD4Q8IYR2 804 aaPredicted RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 VGLL2Q8N8G2 317 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 ZBTB38Q8NAP3 1195 aaPredicted RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 DOCK2Q92608 1830 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 CCT6AP40227 531 aaKnown RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 AARSP49588 968 aaKnown RBP eCLIP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 KRT31Q15323 416 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 MFSD6Q6ZSS7 791 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 CCDC82Q8N4S0 544 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 TTLL11Q8NHH1 800 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
CPT1A-206ENST00000540367 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 CTNND2Q9UQB3 1225 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 TNS2Q63HR2 1409 aa12.68□□□□□ -0.38
CPT1A-206ENST00000540367 A0A0G2JS52 829 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 N4BP3O15049 544 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 PHACTR2O75167 634 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 IL2RBP14784 551 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ITGA6P23229 1130 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 MAGEA9P43362 315 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 SPAG1Q07617 926 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 NCAPH2Q6IBW4 605 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 CMTR1Q8N1G2 835 aaKnown RBP12.67□□□□□ -0.38
CPT1A-206ENST00000540367 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 CTCFLQ8NI51 663 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-206ENST00000540367 STAG1Q8WVM7 1258 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ZBTB9Q96C00 473 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-206ENST00000540367 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ARAP2Q8WZ64 1704 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 MBD4O95243 580 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 PHKA1P46020 1223 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 FERMT2Q96AC1 680 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
CPT1A-206ENST00000540367 SLF1Q9BQI6 1058 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 GREM2Q9H772 168 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 MYH3P11055 1940 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 CDHR2Q9BYE9 1310 aa12.67□□□□□ -0.38
CPT1A-206ENST00000540367 ERICH2A1L162 156 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 RNF40O75150 1001 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 BMP15O95972 392 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 USP14P54578 494 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 TMTC2Q8N394 836 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 FANCBQ8NB91 859 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 MYH13Q9UKX3 1938 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 EIF3CLB5ME19 914 aaKnown RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 PDE8BO95263 885 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 MCM3P25205 808 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 CDC25AP30304 524 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 ZNF654Q8IZM8 581 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 EIF3CQ99613 913 aaKnown RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 RNF26Q9BY78 433 aaPredicted RBP12.66□□□□□ -0.38
CPT1A-206ENST00000540367 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 MYH2Q9UKX2 1941 aa12.66□□□□□ -0.38
CPT1A-206ENST00000540367 ANKRD18BA2A2Z9 1011 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 PSMD14O00487 310 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 PRPF6O94906 941 aaKnown RBP12.65□□□□□ -0.38
CPT1A-206ENST00000540367 SYF2O95926 243 aaKnown RBP12.65□□□□□ -0.38
CPT1A-206ENST00000540367 KRT9P35527 623 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 MAP9Q49MG5 647 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 AFAP1L1Q8TED9 768 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 VPS16Q9H269 839 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 REXO2Q9Y3B8 237 aaKnown RBP12.65□□□□□ -0.38
CPT1A-206ENST00000540367 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 NDUFA10O95299 355 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 XBP1P17861 261 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 KRT2P35908 639 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 CORO7P57737 925 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 EARS2Q5JPH6 523 aaKnown RBP12.65□□□□□ -0.38
CPT1A-206ENST00000540367 KIF6Q6ZMV9 814 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 PLCD3Q8N3E9 789 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 TAB2Q9NYJ8 693 aa12.65□□□□□ -0.38
CPT1A-206ENST00000540367 HPCAL4Q9UM19 191 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms