RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 VCPKMTQ9H867 229 aa17.95■□□□□ 0.46
UBE3B-212ENST00000540230 KANSL2Q9H9L4 492 aa17.95■□□□□ 0.46
UBE3B-212ENST00000540230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.95■□□□□ 0.46
UBE3B-212ENST00000540230 PARP14Q460N5 1801 aa17.95■□□□□ 0.46
UBE3B-212ENST00000540230 MYH4Q9Y623 1939 aa17.95■□□□□ 0.46
UBE3B-212ENST00000540230 PLXNB2O15031 1838 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
UBE3B-212ENST00000540230 CNMDO75829 334 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 FGAP02671 866 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 ALX1Q15699 326 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 FAM47AQ5JRC9 791 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 ARMC5Q96C12 935 aa17.94■□□□□ 0.46
UBE3B-212ENST00000540230 SPDYE16A6NNV3 312 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-212ENST00000540230 SLC9C1Q4G0N8 1177 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-212ENST00000540230 DIAPH3Q9NSV4 1193 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 A0A0G2JMZ2 1700 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 HOXD10P28358 340 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 FLT3LGP49771 235 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 PRMT2P55345 433 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 ERVK-9P63128 1117 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 ERVK-24P63145 666 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 PDE4BQ07343 736 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 ZNF333Q96JL9 665 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 TANGO6Q9C0B7 1094 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 PORCNQ9H237 461 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 BTBD7Q9P203 1132 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 ANAPC4Q9UJX5 808 aa17.93■□□□□ 0.46
UBE3B-212ENST00000540230 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 MYCP01106 439 aaPredicted RBP17.92■□□□□ 0.46
UBE3B-212ENST00000540230 GPRC5AQ8NFJ5 357 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 LPAR1Q92633 364 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 SH2D4AQ9H788 454 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
UBE3B-212ENST00000540230 POTEFA5A3E0 1075 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 RGS19P49795 217 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 HAND2P61296 217 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 TFAP4Q01664 338 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 LBX2Q6XYB7 198 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 NEDD1Q8NHV4 660 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 NKX2-3Q8TAU0 364 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 NBPF3Q9H094 633 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 NYAP2Q9P242 653 aa17.91■□□□□ 0.46
UBE3B-212ENST00000540230 KIAA0100Q14667 2235 aaKnown RBP17.9■□□□□ 0.46
UBE3B-212ENST00000540230 LAMA4Q16363 1823 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
UBE3B-212ENST00000540230 TSPY3P0CV98 308 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 TSPY8P0CW00 308 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 GTF3C2Q8WUA4 911 aaPredicted RBP17.9■□□□□ 0.46
UBE3B-212ENST00000540230 NUP88Q99567 741 aaPredicted RBP17.9■□□□□ 0.46
UBE3B-212ENST00000540230 FBXO28Q9NVF7 368 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 MTMR4Q9NYA4 1195 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 CLIP2Q9UDT6 1046 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 GJD2Q9UKL4 321 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
UBE3B-212ENST00000540230 RBBP6Q7Z6E9 1792 aaKnown RBP17.9■□□□□ 0.46
UBE3B-212ENST00000540230 HIP1O00291 1037 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 WDR46O15213 610 aaKnown RBP17.89■□□□□ 0.45
UBE3B-212ENST00000540230 RAD21O60216 631 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 NMT2O60551 498 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 ELNP15502 786 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 GRK4P32298 578 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 COG2Q14746 738 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 TBC1D10CQ8IV04 446 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 LRRC47Q8N1G4 583 aaKnown RBP17.89■□□□□ 0.45
UBE3B-212ENST00000540230 COA7Q96BR5 231 aa17.89■□□□□ 0.45
UBE3B-212ENST00000540230 COL11A1P12107 1806 aaPredicted RBP17.89■□□□□ 0.45
UBE3B-212ENST00000540230 FLOT1O75955 427 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 NDUFB10O96000 172 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 FGRP09769 529 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 DSG3P32926 999 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 MTFR1Q15390 333 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 FAM83BQ5T0W9 1011 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 SAMD1Q6SPF0 538 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-212ENST00000540230 CENPQQ7L2Z9 268 aaPredicted RBP17.88■□□□□ 0.45
UBE3B-212ENST00000540230 ATG4CQ96DT6 458 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 IL17RBQ9NRM6 502 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 TSPY2A6NKD2 308 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 F5H6K3 240 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 ORC4O43929 436 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 ADCY3O60266 1144 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 MFAP1P55081 439 aaKnown RBP17.88■□□□□ 0.45
UBE3B-212ENST00000540230 KLRC3Q07444 240 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 NBPF11Q86T75 865 aa17.88■□□□□ 0.45
UBE3B-212ENST00000540230 TNRC18O15417 2968 aaPredicted RBP17.87■□□□□ 0.45
UBE3B-212ENST00000540230 RANBP6O60518 1105 aaKnown RBP17.87■□□□□ 0.45
UBE3B-212ENST00000540230 TTLL1O95922 423 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 CHMLP26374 656 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 IRF5Q13568 498 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 RRP12Q5JTH9 1297 aaKnown RBP17.87■□□□□ 0.45
UBE3B-212ENST00000540230 GPR142Q7Z601 462 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 MKL1Q969V6 931 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 HOXC10Q9NYD6 342 aa17.87■□□□□ 0.45
UBE3B-212ENST00000540230 MAPK4P31152 587 aa17.86■□□□□ 0.45
UBE3B-212ENST00000540230 RASGRP2Q7LDG7 609 aa17.86■□□□□ 0.45
UBE3B-212ENST00000540230 SLAIN1Q8ND83 568 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms