RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 TRIM47Q96LD4 638 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
CCDC130-202ENST00000540216 DSCC1Q9BVC3 393 aa15.9■□□□□ 0.14
CCDC130-202ENST00000540216 RPAP3Q9H6T3 665 aaPredicted RBP15.9■□□□□ 0.14
CCDC130-202ENST00000540216 WDR46O15213 610 aaKnown RBP15.89■□□□□ 0.13
CCDC130-202ENST00000540216 FGRP09769 529 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 ATP2B2Q01814 1243 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 MTMR4Q9NYA4 1195 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 RABGAP1Q9Y3P9 1069 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 MYPNQ86TC9 1320 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 ZSWIM8A7E2V4 1837 aa15.89■□□□□ 0.13
CCDC130-202ENST00000540216 MGAMO43451 1857 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 TTLL1O95922 423 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 CHMLP26374 656 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 CTGFP29279 349 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 NT5C2P49902 561 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 CTDSPL2Q05D32 466 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 CEP95Q96GE4 821 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 TANGO6Q9C0B7 1094 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
CCDC130-202ENST00000540216 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 LAMA4Q16363 1823 aa15.88■□□□□ 0.13
CCDC130-202ENST00000540216 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 CCDC85CA6NKD9 419 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 TNPO2O14787 897 aaKnown RBP15.87■□□□□ 0.13
CCDC130-202ENST00000540216 CAPN15O75808 1086 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 TFAP4Q01664 338 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 COG2Q14746 738 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 BMP2KLQ5H9B9 411 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 MKL1Q969V6 931 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 COA7Q96BR5 231 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 HOXC10Q9NYD6 342 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 RBPJLQ9UBG7 517 aa15.87■□□□□ 0.13
CCDC130-202ENST00000540216 SPDYE16A6NNV3 312 aaPredicted RBP15.86■□□□□ 0.13
CCDC130-202ENST00000540216 ZNF213O14771 459 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 ERVK-9P63128 1117 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 ERVK-24P63145 666 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 CCNA1P78396 465 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 FAM47AQ5JRC9 791 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 KIAA1755Q5JYT7 1200 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 MB21D1Q8N884 522 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 STAG1Q8WVM7 1258 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 ARMC5Q96C12 935 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 TXNRD2Q9NNW7 524 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 CLIP2Q9UDT6 1046 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 PTCH2Q9Y6C5 1203 aa15.86■□□□□ 0.13
CCDC130-202ENST00000540216 RANBP6O60518 1105 aaKnown RBP15.85■□□□□ 0.13
CCDC130-202ENST00000540216 MAPK4P31152 587 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 PRKCZQ05513 592 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 IMMTQ16891 758 aaKnown RBP15.85■□□□□ 0.13
CCDC130-202ENST00000540216 SLC9C1Q4G0N8 1177 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 NBPF11Q86T75 865 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 GMCL1P1Q8NEA9 526 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 TOMM22Q9NS69 142 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 MYH4Q9Y623 1939 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
CCDC130-202ENST00000540216 F5H6K3 240 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 SGSM2O43147 1006 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 RAD21O60216 631 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 FLOT1O75955 427 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 ECM2O94769 699 aaPredicted RBP15.84■□□□□ 0.13
CCDC130-202ENST00000540216 HAND2P61296 217 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 KLRC3Q07444 240 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 IRF5Q13568 498 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 TBC1D10CQ8IV04 446 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 CCAR1Q8IX12 1150 aaKnown RBP15.84■□□□□ 0.13
CCDC130-202ENST00000540216 RAET1EQ8TD07 263 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 IL25Q9H293 177 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 TACC3Q9Y6A5 838 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 RLFQ13129 1914 aa15.84■□□□□ 0.13
CCDC130-202ENST00000540216 CNMDO75829 334 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 NDUFB10O96000 172 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 DSG3P32926 999 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 NOVP48745 357 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 SOCS4Q8WXH5 440 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 ESR2Q92731 530 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
CCDC130-202ENST00000540216 PARP14Q460N5 1801 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 FLT3LGP49771 235 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 RRP12Q5JTH9 1297 aaKnown RBP15.82■□□□□ 0.12
CCDC130-202ENST00000540216 FAM83BQ5T0W9 1011 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
CCDC130-202ENST00000540216 SLAIN1Q8ND83 568 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 IL17RBQ9NRM6 502 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 PPP1R9AQ9ULJ8 1098 aa15.82■□□□□ 0.12
CCDC130-202ENST00000540216 GRK4P32298 578 aa15.81■□□□□ 0.12
CCDC130-202ENST00000540216 NEDD4P46934 1319 aa15.81■□□□□ 0.12
CCDC130-202ENST00000540216 Q3C1V9 767 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms