RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ALDH1L2Q3SY69 923 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-219ENST00000539952 WDR78Q5VTH9 848 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 OLFML2BQ68BL8 750 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 LBX2Q6XYB7 198 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 ATXN2LQ8WWM7 1075 aaKnown RBP7.28□□□□□ -1.24
CPSF7-219ENST00000539952 C12orf42Q96LP6 360 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 PRDM5Q9NQX1 630 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-219ENST00000539952 FLRT1Q9NZU1 646 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 HMG20BQ9P0W2 317 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 BOLA1Q9Y3E2 137 aa7.28□□□□□ -1.24
CPSF7-219ENST00000539952 SEPT4O43236 478 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 CNMDO75829 334 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 IGHA2P01877 340 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 HLA-DOAP06340 250 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 CYBAP13498 195 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 PDE4AP27815 886 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 CYP2C19P33261 490 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 ADCYAP1R1P41586 468 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 GRB14Q14449 540 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 COG2Q14746 738 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 E2F4Q16254 413 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 NAA16Q6N069 864 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 POTEEQ6S8J3 1075 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 TBC1D9Q6ZT07 1266 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 NPLOC4Q8TAT6 608 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 SH3RF3Q8TEJ3 882 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 ZNF384Q8TF68 577 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 TGFBRAP1Q8WUH2 860 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 SSH1Q8WYL5 1049 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 FAM122AQ96E09 287 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 DDX27Q96GQ7 796 aaKnown RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 TMEM121BQ9BXQ6 578 aaPredicted RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 ZBTB21Q9ULJ3 1066 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 PA2G4Q9UQ80 394 aaKnown RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 MYH2Q9UKX2 1941 aa7.27□□□□□ -1.25
CPSF7-219ENST00000539952 DDX60LQ5H9U9 1706 aaKnown RBP7.27□□□□□ -1.25
CPSF7-219ENST00000539952 TRIM43BA6NCK2 446 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 C2orf72A6NCS6 295 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 GDF11O95390 407 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 SEC24BO95487 1268 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 RAG1P15918 1043 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 ARID4AP29374 1257 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 PLA2G5P39877 138 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 JAG1P78504 1218 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TLE2Q04725 743 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TFCP2Q12800 502 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 GRIN2CQ14957 1233 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TRIM60Q495X7 471 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 CCDC158Q5M9N0 1113 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 AKNAD1Q5T1N1 836 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TATDN1Q6P1N9 297 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 CCDC174Q6PII3 467 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 CERS3Q8IU89 383 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TRIM43Q96BQ3 446 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 RNPC3Q96LT9 517 aaKnown RBP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 TOX2Q96NM4 488 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 GAS2L1Q99501 681 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 KIAA1683Q9H0B3 1180 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 ZNF576Q9H609 170 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 PDLIM7Q9NR12 457 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 AATFQ9NY61 560 aaKnown RBP eCLIP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 PALD1Q9ULE6 856 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 ARIH1Q9Y4X5 557 aaPredicted RBP7.26□□□□□ -1.25
CPSF7-219ENST00000539952 NDUFB9Q9Y6M9 179 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 PTPRFP10586 1907 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 PHIPQ8WWQ0 1821 aa7.26□□□□□ -1.25
CPSF7-219ENST00000539952 E9PSI1 815 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 KIAA0355O15063 1070 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 GH2P01242 217 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 GNAI3P08754 354 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 CLTBP09497 229 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 RRP1P56182 461 aaKnown RBP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 MRPS5P82675 430 aaKnown RBP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 G3BP1Q13283 466 aaKnown RBP eCLIP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 LRRC41Q15345 812 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 CERKLQ49MI3 558 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 PPP1R15BQ5SWA1 713 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 SH3RF1Q7Z6J0 888 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 RNF180Q86T96 592 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 MAPKAPK5Q8IW41 473 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 ABRAQ8N0Z2 381 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 SHCBP1Q8NEM2 672 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 TRPV1Q8NER1 839 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 FERMT2Q96AC1 680 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 ASB2Q96Q27 587 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 FEZ1Q99689 392 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 MROH8Q9H579 483 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 GPHNQ9NQX3 736 aaPredicted RBP7.25□□□□□ -1.25
CPSF7-219ENST00000539952 TMEM39AQ9NV64 488 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 BTBD7Q9P203 1132 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 RCAN3Q9UKA8 241 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 DOCK1Q14185 1865 aa7.25□□□□□ -1.25
CPSF7-219ENST00000539952 TTC28Q96AY4 2481 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 DCDC2CA8MYV0 355 aa7.24□□□□□ -1.25
CPSF7-219ENST00000539952 SRGAP3O43295 1099 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms