RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LIG1P18858 919 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 SEMA3FQ13275 785 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 ME3Q16798 604 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 ANO6Q4KMQ2 910 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 RETREG3Q86VR2 466 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CCDC83Q8IWF9 413 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 DRC7Q8IY82 874 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CLASRPQ8N2M8 674 aaKnown RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 SPC24Q8NBT2 197 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CACTINQ8WUQ7 758 aaKnown RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CDCA5Q96FF9 252 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 FAM89AQ96GI7 184 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 SPATA32Q96LK8 384 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 TIGD1Q96MW7 591 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 JAKMIP1Q96N16 626 aaKnown RBP8.86□□□□□ -0.99
CCDC60-204ENST00000539847 GMLQ99445 158 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 BPIFA3Q9BQP9 254 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 DACT1Q9NYF0 836 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 CLIP2Q9UDT6 1046 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 GGA1Q9UJY5 639 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 RCOR1Q9UKL0 485 aa8.86□□□□□ -0.99
CCDC60-204ENST00000539847 TNRC18O15417 2968 aaPredicted RBP8.85□□□□□ -0.99
CCDC60-204ENST00000539847 GOLGA6L19H0YKK7 550 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 TK2O00142 265 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 TULP2O00295 520 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 NRDCO43847 1150 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 STX1AQ16623 288 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 CCDC152Q4G0S7 254 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 NAA16Q6N069 864 aaPredicted RBP8.85□□□□□ -0.99
CCDC60-204ENST00000539847 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
CCDC60-204ENST00000539847 LUZP1Q86V48 1076 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 RASAL3Q86YV0 1011 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 CCDC191Q8NCU4 936 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 HS3ST6Q96QI5 342 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 NAT10Q9H0A0 1025 aaKnown RBP8.85□□□□□ -0.99
CCDC60-204ENST00000539847 IL25Q9H293 177 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 ANO10Q9NW15 660 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
CCDC60-204ENST00000539847 XDHP47989 1333 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 MYO3BQ8WXR4 1341 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 MYO1BO43795 1136 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 UFL1O94874 794 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 PCCAP05165 728 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 H2AFXP16104 143 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 RPS6KB1P23443 525 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 TM4SF4P48230 202 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 ST3GAL1Q11201 340 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 SCARF1Q14162 830 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 FOXD4L6Q3SYB3 417 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 TSHZ3Q63HK5 1081 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 BLOC1S3Q6QNY0 202 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 FOXD4L3Q6VB84 417 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 CCAR2Q8N163 923 aaKnown RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 DNAJC2Q99543 621 aaKnown RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 KCNQ5Q9NR82 932 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 TMEM51Q9NW97 253 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 ANKIB1Q9P2G1 1089 aa8.84□□□□□ -0.99
CCDC60-204ENST00000539847 V9GYY5 206 aaPredicted RBP8.84□□□□□ -0.99
CCDC60-204ENST00000539847 VPS37CA5D8V6 355 aaPredicted RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 USP17L3A6NCW0 530 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 USP17L4A6NCW7 530 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 UNCXA6NJT0 531 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 PDE8AO60658 829 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 LARGE1O95461 756 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 SKILP12757 684 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 ATP2B4P23634 1241 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 TUBB4BP68371 445 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 SREBF2Q12772 1141 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 RESTQ13127 1097 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 BEND3Q5T5X7 828 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 ANGEL2Q5VTE6 544 aaKnown RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 CWC27Q6UX04 472 aaKnown RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 DLK2Q6UY11 383 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 FILIP1Q7Z7B0 1213 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 CCDC150Q8NCX0 1101 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 FAM163AQ96GL9 167 aaPredicted RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 C16orf45Q96MC5 204 aaPredicted RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 MYOZ2Q9NPC6 264 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 TPCN1Q9ULQ1 816 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 RBM8AQ9Y5S9 174 aaKnown RBP8.83□□□□□ -1
CCDC60-204ENST00000539847 AKAP11Q9UKA4 1901 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 RFX7Q2KHR2 1363 aa8.83□□□□□ -1
CCDC60-204ENST00000539847 ATP5J2-PTCD1G3V325 749 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 SLC27A2O14975 620 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 SRGAP3O43295 1099 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 ATP9BO43861 1147 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 ALDH1A1P00352 501 aa8.82□□□□□ -1
CCDC60-204ENST00000539847 HMGB1P09429 215 aaKnown RBP8.82□□□□□ -1
CCDC60-204ENST00000539847 CYP2C19P33261 490 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms