RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 IL6STP40189 918 aaPredicted RBP23.01■■□□□ 1.27
TMEM260-203ENST00000539559 BRD3Q15059 726 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 ALX1Q15699 326 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 ZNF579Q8NAF0 562 aaKnown RBP23.01■■□□□ 1.27
TMEM260-203ENST00000539559 SDR42E1Q8WUS8 393 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 TRIM34Q9BYJ4 488 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 KRT23Q9C075 422 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 TRIM10Q9UDY6 481 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 ERICH2A1L162 156 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 PPP1R3GB7ZBB8 358 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 TFR2Q9UP52 801 aa23.01■■□□□ 1.27
TMEM260-203ENST00000539559 TRIM75PA6NK02 468 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 MAP3K12Q12852 859 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 NOA1Q8NC60 698 aaKnown RBP23■■□□□ 1.27
TMEM260-203ENST00000539559 BAZ2BQ9UIF8 2168 aaKnown RBP23■■□□□ 1.27
TMEM260-203ENST00000539559 CTAGE9A4FU28 777 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 SART3Q15020 963 aaKnown RBP23■■□□□ 1.27
TMEM260-203ENST00000539559 CDKAL1Q5VV42 579 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 NCAPH2Q6IBW4 605 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 KANK3Q6NY19 840 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 RASGRP2Q7LDG7 609 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 ZNF512BQ96KM6 892 aaPredicted RBP23■■□□□ 1.27
TMEM260-203ENST00000539559 SLF1Q9BQI6 1058 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 CNNM2Q9H8M5 875 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 TAB2Q9NYJ8 693 aa23■■□□□ 1.27
TMEM260-203ENST00000539559 FAN1Q9Y2M0 1017 aa22.99■■□□□ 1.27
TMEM260-203ENST00000539559 BCAMP50895 628 aa22.99■■□□□ 1.27
TMEM260-203ENST00000539559 NGLY1Q96IV0 654 aa22.99■■□□□ 1.27
TMEM260-203ENST00000539559 CEP131Q9UPN4 1083 aa22.99■■□□□ 1.27
TMEM260-203ENST00000539559 PLEKHA8P1O95397 391 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 UQCRFS1P1P0C7P4 283 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 PUM3Q15397 648 aaKnown RBP22.98■■□□□ 1.27
TMEM260-203ENST00000539559 FOXR1Q6PIV2 292 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 C10orf67Q8IYJ2 551 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 CEP112Q8N8E3 955 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 AK7Q96M32 723 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 ERVV-1B6SEH8 477 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 N4BP3O15049 544 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 KRT31Q15323 416 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
TMEM260-203ENST00000539559 C8orf37Q96NL8 207 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 UBAC1Q9BSL1 405 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 V9GY48 417 aaPredicted RBP22.98■■□□□ 1.27
TMEM260-203ENST00000539559 CHD4Q14839 1912 aa22.98■■□□□ 1.27
TMEM260-203ENST00000539559 CYP2D7A0A087X1C5 515 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 ATP6V1AP38606 617 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 PKN1Q16512 942 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 STAG1Q8WVM7 1258 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 LPIN2Q92539 896 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 NUP88Q99567 741 aaPredicted RBP22.97■■□□□ 1.27
TMEM260-203ENST00000539559 AATFQ9NY61 560 aaKnown RBP eCLIP22.97■■□□□ 1.27
TMEM260-203ENST00000539559 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.97■■□□□ 1.27
TMEM260-203ENST00000539559 TNKSO95271 1327 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 FILIP1LQ4L180 1135 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 MUM1L1Q5H9M0 696 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 HDXQ7Z353 690 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 EXOC4Q96A65 974 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 CHP1Q99653 195 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 L1RE1Q9UN81 338 aa22.97■■□□□ 1.27
TMEM260-203ENST00000539559 RRAGBQ5VZM2 374 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 SH3RF1Q7Z6J0 888 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 ADGRA1Q86SQ6 560 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 LOC102724428A0A0B4J2F2 783 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 ENC1O14682 589 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 ARHGAP25P42331 645 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 SIK1P57059 783 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 AKAP17AQ02040 695 aaKnown RBP22.96■■□□□ 1.27
TMEM260-203ENST00000539559 CCDC102AQ96A19 550 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 NAA15Q9BXJ9 866 aaKnown RBP22.96■■□□□ 1.27
TMEM260-203ENST00000539559 XDHP47989 1333 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 CDHR2Q9BYE9 1310 aa22.96■■□□□ 1.27
TMEM260-203ENST00000539559 ADAMTS3O15072 1205 aa22.95■■□□□ 1.27
TMEM260-203ENST00000539559 FGFR2P21802 821 aa22.95■■□□□ 1.27
TMEM260-203ENST00000539559 FAM98CQ17RN3 349 aaKnown RBP22.95■■□□□ 1.27
TMEM260-203ENST00000539559 MSANTD4Q8NCY6 345 aa22.95■■□□□ 1.27
TMEM260-203ENST00000539559 ABHD10Q9NUJ1 306 aa22.95■■□□□ 1.27
TMEM260-203ENST00000539559 RAB21Q9UL25 225 aa22.95■■□□□ 1.27
TMEM260-203ENST00000539559 NAPGQ99747 312 aaPredicted RBP22.95■■□□□ 1.26
TMEM260-203ENST00000539559 CCDC87Q9NVE4 849 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 HDAC6Q9UBN7 1215 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 PPARAQ07869 468 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 VPS72Q15906 364 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 CNGA4Q8IV77 575 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 NACAP1Q9BZK3 213 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 GUCA1BQ9UMX6 200 aa22.95■■□□□ 1.26
TMEM260-203ENST00000539559 CCDC196A0A1B0GTZ2 297 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 CTAGE15A4D2H0 777 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 CTAGE8P0CG41 777 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 KRT2P35908 639 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 CTAGE6Q86UF2 777 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 CTAGE4Q8IX94 777 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 GDAP1L1Q96MZ0 367 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 MTRQ99707 1265 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 LRRIQ3A6PVS8 624 aaPredicted RBP22.94■■□□□ 1.26
TMEM260-203ENST00000539559 EIF5P55010 431 aaKnown RBP22.94■■□□□ 1.26
TMEM260-203ENST00000539559 PTGDRQ13258 359 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 CASP8Q14790 479 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 INTS5Q6P9B9 1019 aaKnown RBP22.94■■□□□ 1.26
TMEM260-203ENST00000539559 PLEKHA4Q9H4M7 779 aa22.94■■□□□ 1.26
TMEM260-203ENST00000539559 LRP2BPQ9P2M1 347 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms