RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 FAM114A1Q8IWE2 563 aa6.48□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ERMNQ8TAM6 284 aa6.48□□□□□ -1.37
RAB3GAP1-207ENST00000539493 COPRSQ9NQ92 184 aa6.48□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TLR7Q9NYK1 1049 aaKnown RBP6.48□□□□□ -1.37
RAB3GAP1-207ENST00000539493 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 COL22A1Q8NFW1 1626 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GPR75-ASB3A0A0A6YYF3 556 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ENO4A6NNW6 628 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 N4BP1O75113 896 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 HSPA4P34932 840 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 NEK4P51957 841 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PTPN12Q05209 780 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PRPF4BQ13523 1007 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CUL3Q13618 768 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 BTG3Q14201 252 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EMC10Q5UCC4 262 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GBP7Q8N8V2 638 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CNKSR1Q969H4 720 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SH3GL2Q99962 352 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 BRD8Q9H0E9 1235 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCDC8Q9H0W5 538 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ANKZF1Q9H8Y5 726 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SLC40A1Q9NP59 571 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ASB3Q9Y575 518 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ATP6V1DQ9Y5K8 247 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ATP6V1G1O75348 118 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SKAP2O75563 359 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 STIP1P31948 543 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SKOR1P84550 965 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PPFIA1Q13136 1202 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 DYNC1I2Q13409 638 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 KIAA0753Q2KHM9 967 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PIGBQ92521 554 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 FAM81BQ96LP2 452 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SPAG5Q96R06 1193 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 LSG1Q9H089 658 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RETREG1Q9H6L5 497 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 DDX25Q9UHL0 483 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 SHTN1A0MZ66 631 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TESPA1A2RU30 521 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 GOLGA6L9A6NEM1 432 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TIMM44O43615 452 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 KIF5CO60282 957 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 NPTXRO95502 500 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ZSCAN22P10073 491 aaPredicted RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PSMC4P43686 418 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCNG1P51959 295 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 RIPK1Q13546 671 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CASP8Q14790 479 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CMPK2Q5EBM0 449 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 WDR93Q6P2C0 686 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 CCHCR1Q8TD31 782 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 EVI5LQ96CN4 794 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 MOV10L1Q9BXT6 1211 aaKnown RBP6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PHACTR1Q9C0D0 580 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ZBTB3Q9H5J0 574 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 QPCTLQ9NXS2 382 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
RAB3GAP1-207ENST00000539493 PLCH1Q4KWH8 1693 aa6.46□□□□□ -1.37
RAB3GAP1-207ENST00000539493 TJP1Q07157 1748 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 RNF40O75150 1001 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 VIL1P09327 827 aaKnown RBP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FOXO4P98177 505 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PPP2R3AQ06190 1150 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 Q4G0T1 1027 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CYB5D1Q6P9G0 228 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 C6orf89Q6UWU4 347 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ANKRD13BQ86YJ7 626 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 NUP133Q8WUM0 1156 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 BPIFA3Q9BQP9 254 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TRIM4Q9C037 500 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GPCPD1Q9NPB8 672 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 MAPK8IP1Q9UQF2 711 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CNPY2Q9Y2B0 182 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 CNGA1P29973 690 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GBP2P32456 591 aaPredicted RBP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FLT3P36888 993 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 XRCC4Q13426 336 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ARID5BQ14865 1188 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 ANO6Q4KMQ2 910 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 AKNAD1Q5T1N1 836 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 LMBR1LQ6UX01 489 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 OTUD6AQ7L8S5 288 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 FUKQ8N0W3 1084 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 IRF2BPLQ9H1B7 796 aa6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 DDX19AQ9NUU7 478 aaKnown RBP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TRMT1Q9NXH9 659 aaKnown RBP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TPX2Q9ULW0 747 aaKnown RBP6.46□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GOLGA6L19H0YKK7 550 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 M0R2C6 588 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TPPPO94811 219 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 GNAQP50148 359 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TFCP2Q12800 502 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TNNI3KQ59H18 835 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 PRPF40BQ6NWY9 871 aaKnown RBP6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 C16orf87Q6PH81 154 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 TEX9Q8N6V9 391 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 KIFC2Q96AC6 838 aa6.45□□□□□ -1.38
RAB3GAP1-207ENST00000539493 SCLT1Q96NL6 688 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms