RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 VCPKMTQ9H867 229 aa18.68■□□□□ 0.58
CIT-210ENST00000539413 GREB1LQ9C091 1923 aaPredicted RBP18.68■□□□□ 0.58
CIT-210ENST00000539413 CNMDO75829 334 aa18.67■□□□□ 0.58
CIT-210ENST00000539413 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
CIT-210ENST00000539413 ERVK-24P63145 666 aa18.67■□□□□ 0.58
CIT-210ENST00000539413 ZNF589Q86UQ0 364 aaPredicted RBP18.67■□□□□ 0.58
CIT-210ENST00000539413 ZNF444Q8N0Y2 327 aaPredicted RBP18.67■□□□□ 0.58
CIT-210ENST00000539413 SPICE1Q8N0Z3 855 aa18.67■□□□□ 0.58
CIT-210ENST00000539413 TANGO6Q9C0B7 1094 aa18.67■□□□□ 0.58
CIT-210ENST00000539413 SPDYE16A6NNV3 312 aaPredicted RBP18.66■□□□□ 0.58
CIT-210ENST00000539413 IRF5Q13568 498 aa18.66■□□□□ 0.58
CIT-210ENST00000539413 LPAR1Q92633 364 aa18.66■□□□□ 0.58
CIT-210ENST00000539413 PORCNQ9H237 461 aa18.66■□□□□ 0.58
CIT-210ENST00000539413 ZNF287Q9HBT7 754 aa18.66■□□□□ 0.58
CIT-210ENST00000539413 RABGAP1Q9Y3P9 1069 aa18.66■□□□□ 0.58
CIT-210ENST00000539413 IGKV6D-41A0A0C4DH26 115 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 ADCY3O60266 1144 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 SLC3A2P08195 630 aaKnown RBP18.65■□□□□ 0.58
CIT-210ENST00000539413 ELNP15502 786 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 PDE4BQ07343 736 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 MTFR1Q15390 333 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 LBX2Q6XYB7 198 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 SLAIN1Q8ND83 568 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 TMEM106CQ9BVX2 250 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 BTBD7Q9P203 1132 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 CCDC171Q6TFL3 1326 aa18.65■□□□□ 0.58
CIT-210ENST00000539413 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
CIT-210ENST00000539413 CENPFP49454 3210 aa18.64■□□□□ 0.58
CIT-210ENST00000539413 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
CIT-210ENST00000539413 COG2Q14746 738 aa18.64■□□□□ 0.57
CIT-210ENST00000539413 ALX1Q15699 326 aa18.64■□□□□ 0.57
CIT-210ENST00000539413 INCENPQ9NQS7 918 aa18.64■□□□□ 0.57
CIT-210ENST00000539413 NYAP2Q9P242 653 aa18.64■□□□□ 0.57
CIT-210ENST00000539413 GJD2Q9UKL4 321 aa18.64■□□□□ 0.57
CIT-210ENST00000539413 RAD21O60216 631 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 FGAP02671 866 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 HSPD1P10809 573 aaKnown RBP18.63■□□□□ 0.57
CIT-210ENST00000539413 GSPT1P15170 499 aaKnown RBP18.63■□□□□ 0.57
CIT-210ENST00000539413 EN2P19622 333 aaPredicted RBP18.63■□□□□ 0.57
CIT-210ENST00000539413 MAPK4P31152 587 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 FAM47AQ5JRC9 791 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
CIT-210ENST00000539413 PXYLP1Q8TE99 480 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 CEP95Q96GE4 821 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 HOXC10Q9NYD6 342 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 BIN2Q9UBW5 565 aaPredicted RBP18.63■□□□□ 0.57
CIT-210ENST00000539413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
CIT-210ENST00000539413 TACC3Q9Y6A5 838 aa18.63■□□□□ 0.57
CIT-210ENST00000539413 FLOT1O75955 427 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 TSPY3P0CV98 308 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 TSPY8P0CW00 308 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 TFAP4Q01664 338 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 TTC22Q5TAA0 569 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
CIT-210ENST00000539413 GPR142Q7Z601 462 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 NEDD1Q8NHV4 660 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 DIAPH3Q9NSV4 1193 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 MTMR4Q9NYA4 1195 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 CLIP2Q9UDT6 1046 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 PLIN4Q96Q06 1357 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 PLXNB2O15031 1838 aa18.62■□□□□ 0.57
CIT-210ENST00000539413 RLFQ13129 1914 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 INHAP05111 366 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 DSG3P32926 999 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 UBXN2AP68543 259 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 CCNA1P78396 465 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
CIT-210ENST00000539413 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 ATG4CQ96DT6 458 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
CIT-210ENST00000539413 ZMYM6O95789 1325 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 F5H6K3 240 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 HIP1O00291 1037 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 CCL5P13501 91 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 CYP2B6P20813 491 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
CIT-210ENST00000539413 KLRC3Q07444 240 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 FAM83BQ5T0W9 1011 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 SOCS4Q8WXH5 440 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 NUP88Q99567 741 aaPredicted RBP18.6■□□□□ 0.57
CIT-210ENST00000539413 NUDT12Q9BQG2 462 aa18.6■□□□□ 0.57
CIT-210ENST00000539413 TTLL1O95922 423 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 NDUFB10O96000 172 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 MORN1Q5T089 497 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 WDR78Q5VTH9 848 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
CIT-210ENST00000539413 MKL1Q969V6 931 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 UNC93B1Q9H1C4 597 aa18.59■□□□□ 0.57
CIT-210ENST00000539413 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
CIT-210ENST00000539413 PARP14Q460N5 1801 aa18.58■□□□□ 0.57
CIT-210ENST00000539413 TSPY2A6NKD2 308 aa18.58■□□□□ 0.56
CIT-210ENST00000539413 FGRP09769 529 aa18.58■□□□□ 0.56
CIT-210ENST00000539413 HAND2P61296 217 aa18.58■□□□□ 0.56
CIT-210ENST00000539413 USP6NLQ92738 828 aa18.58■□□□□ 0.56
CIT-210ENST00000539413 MOV10L1Q9BXT6 1211 aaKnown RBP18.58■□□□□ 0.56
CIT-210ENST00000539413 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms