RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CETN3O15182 167 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 FGAP02671 866 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 PPARDQ03181 441 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 KRT25Q7Z3Z0 450 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 CABP7Q86V35 215 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 NELFCDQ8IXH7 590 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 TSNARE1Q96NA8 513 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
CACNB1-206ENST00000539338 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 OSBPP22059 807 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 ADCY7P51828 1080 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 MXRA7P84157 204 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 PRDM15P57071 1507 aaPredicted RBP16.18■□□□□ 0.18
CACNB1-206ENST00000539338 KRT5P13647 590 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 TAF12Q16514 161 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 PSMD1Q99460 953 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 NUP58Q9BVL2 599 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 RABEP2Q9H5N1 569 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 ADCY9O60503 1353 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 SCRN1Q12765 414 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 SEL1L2Q5TEA6 688 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 HAUS3Q68CZ6 603 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 IFNL3Q8IZI9 196 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 SLC10A4Q96EP9 437 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNB1-206ENST00000539338 MAGEA1P43355 309 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 VWA3BQ502W6 1294 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 DESI2Q9BSY9 194 aa16.18■□□□□ 0.18
CACNB1-206ENST00000539338 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 USP17L21D6R901 530 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 PDE6AP16499 860 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CNGA1P29973 690 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 ZYXQ15942 572 aaKnown RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CCDC26Q8TAB7 109 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 SDR42E1Q8WUS8 393 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 M0QZ92 97 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 ZNF500O60304 480 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 HARSP12081 509 aaKnown RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 NPR1P16066 1061 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 GTF2A1P52655 376 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CCDC6Q16204 474 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 MAEAQ7L5Y9 396 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 MAP4K1Q92918 833 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 PPEF1O14829 653 aaPredicted RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 SPOPO43791 374 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 TUBB2AQ13885 445 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CALCRLQ16602 461 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 TUBB2BQ9BVA1 445 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 CLIC4Q9Y696 253 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 NDUFA8P51970 172 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 ZBTB16Q05516 673 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 BIRC3Q13489 604 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 TTC14Q96N46 770 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 TRIM31Q9BZY9 425 aa16.17■□□□□ 0.18
CACNB1-206ENST00000539338 DBNLQ9UJU6 430 aaKnown RBP16.17■□□□□ 0.18
CACNB1-206ENST00000539338 ARAP3Q8WWN8 1544 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 ZBED4O75132 1171 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 FAM207AQ9NSI2 230 aaPredicted RBP16.16■□□□□ 0.18
CACNB1-206ENST00000539338 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
CACNB1-206ENST00000539338 CCDC63Q8NA47 563 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 CEP63Q96MT8 703 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
CACNB1-206ENST00000539338 FAM170AA1A519 330 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 SLC1A4P43007 532 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 GYG1P46976 350 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 BCAMP50895 628 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 TTC16Q8NEE8 873 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
CACNB1-206ENST00000539338 ZMYM6O95789 1325 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 KDM4FA0A1W2PPD8 638 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 USH1GQ495M9 461 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 TTC31Q49AM3 519 aaPredicted RBP16.15■□□□□ 0.18
CACNB1-206ENST00000539338 CALUO43852 315 aaPredicted RBP16.15■□□□□ 0.18
CACNB1-206ENST00000539338 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
CACNB1-206ENST00000539338 KLHL7Q8IXQ5 586 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 MASTLQ96GX5 879 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 GDAP1L1Q96MZ0 367 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 METP08581 1390 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 DDX39AO00148 427 aaKnown RBP16.15■□□□□ 0.18
CACNB1-206ENST00000539338 CMA1P23946 247 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 TYW1BQ6NUM6 668 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 FANCBQ8NB91 859 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 FANCLQ9NW38 375 aa16.15■□□□□ 0.18
CACNB1-206ENST00000539338 TTC37Q6PGP7 1564 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms