RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303	CCNF	P41002	786 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	C21orf62-AS1	Q17RA5	79 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	SV2C	Q496J9	727 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM20C	Q8IXL6	584 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	CCDC144CP	Q8IYA2	1237 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	MFSD2A	Q8NA29	543 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	ADCY4	Q8NFM4	1077 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	SCARF2	Q96GP6	870 aa	Predicted RBP	4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	GPATCH3	Q96I76	525 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	KREMEN1	Q96MU8	473 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	KLHL25	Q9H0H3	589 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	KCNF1	Q9H3M0	494 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	PRDM10	Q9NQV6	1147 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	TMEM260	Q9NX78	707 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	MINPP1	Q9UNW1	487 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	CEP131	Q9UPN4	1083 aa		4.61	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM95C	A0A1B0GW59	222 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	EOMES	O95936	686 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	ADM	P35318	185 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	GRIA2	P42262	883 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	NFKBIB	Q15653	356 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	HEATR6	Q6AI08	1181 aa	Known RBP	4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	CD163	Q86VB7	1156 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	TXNRD3	Q86VQ6	643 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	JMY	Q8N9B5	988 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	THAP3	Q8WTV1	239 aa	Predicted RBP	4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	PPP1R14A	Q96A00	147 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	DHRS1	Q96LJ7	313 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	PUS7	Q96PZ0	661 aa	Known RBP	4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	NACC1	Q96RE7	527 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	DUSP23	Q9BVJ7	150 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	SPATA9	Q9BWV2	254 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	ARHGEF4	Q9NR80	690 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303	STK17A	Q9UEE5	414 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303		U3KQE9	123 aa		4.6	□□□□□ -1.67
SNHG1-210	ENST00000539303		A0A1W2PQU0	124 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	HMX2	A2RU54	273 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	ANKRD34B	A5PLL1	514 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM181B	A6NEQ2	426 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	PRR33	A8MZF0	331 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	C1QTNF9B	B2RNN3	333 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	PPP1R12A	O14974	1030 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	ASMTL	O95671	621 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	ITGAV	P06756	1048 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	FAM87A	P0C7U9	286 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	L1CAM	P32004	1257 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	CBX2	Q14781	532 aa	Predicted RBP	4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	BBS9	Q3SYG4	887 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	PLEKHG4	Q58EX7	1191 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	BEND4	Q6ZU67	534 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	ALYREF	Q86V81	257 aa	Known RBP	4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	ZNF227	Q86WZ6	799 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	GATA6	Q92908	595 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	BRF1	Q92994	677 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303		Q96M66	194 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	CD2AP	Q9Y5K6	639 aa		4.59	□□□□□ -1.67
SNHG1-210	ENST00000539303	CD247	P20963	164 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	CANX	P27824	592 aa	Known RBP	4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	AUH	Q13825	339 aa	Known RBP	4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	MAP7	Q14244	749 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	SF1	Q15637	639 aa	Known RBP	4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	UVSSA	Q2YD98	709 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM209A	Q5JX71	171 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	TMC3	Q7Z5M5	1100 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	ADAT2	Q7Z6V5	191 aa	Known RBP	4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	HOMER1	Q86YM7	354 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	C7orf61	Q8IZ16	206 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	LRRN4CL	Q8ND94	238 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	RNF141	Q8WVD5	230 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	APPBP2	Q92624	585 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	DCAF5	Q96JK2	942 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	EXOC2	Q96KP1	924 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	YIPF2	Q9BWQ6	316 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	GP6	Q9HCN6	339 aa		4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	TPX2	Q9ULW0	747 aa	Known RBP	4.58	□□□□□ -1.68
SNHG1-210	ENST00000539303	SHISA3	A0PJX4	238 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM170B	A6NMN3	283 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	MEIS1	O00470	390 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	CBX7	O95931	251 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	ITGB2	P05107	769 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	HMGB1	P09429	215 aa	Known RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZNF445	P59923	1031 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	PPP2R2A	P63151	447 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	PPP2R5D	Q14738	602 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	NBPF9	Q3BBW0	867 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	FAM214B	Q7L5A3	538 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	SMARCC1	Q92922	1105 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	ZNF669	Q96BR6	464 aa	Predicted RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	HEXIM2	Q96MH2	286 aa	Known RBP	4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	APBA2	Q99767	749 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	PRDM14	Q9GZV8	571 aa		4.57	□□□□□ -1.68
SNHG1-210	ENST00000539303	NOL6	Q9H6R4	1146 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms