RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 DCAF15Q66K64 600 aa11.13□□□□□ -0.63
PHC1-206ENST00000539063 DPY19L2Q6NUT2 758 aa11.13□□□□□ -0.63
PHC1-206ENST00000539063 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
PHC1-206ENST00000539063 METTL16Q86W50 562 aaKnown RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 CMTR1Q8N1G2 835 aaKnown RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 LRRC47Q8N1G4 583 aaKnown RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 CCDC12Q8WUD4 166 aaPredicted RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 SPATA32Q96LK8 384 aa11.13□□□□□ -0.63
PHC1-206ENST00000539063 ARHGEF10LQ9HCE6 1279 aa11.13□□□□□ -0.63
PHC1-206ENST00000539063 ZNF646O15015 1829 aaPredicted RBP11.13□□□□□ -0.63
PHC1-206ENST00000539063 CNTNAP5Q8WYK1 1306 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 FAM196BA6NMK8 535 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 KLRF2D3W0D1 207 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 TBC1D12O60347 775 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 GDF11O95390 407 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 SCG2P13521 617 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 CALML3P27482 149 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 RASA3Q14644 834 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
PHC1-206ENST00000539063 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
PHC1-206ENST00000539063 TMEM87AQ8NBN3 555 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 CCDC148Q8NFR7 591 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 SPZ1Q9BXG8 430 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 TMEM39BQ9GZU3 492 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 LMBRD1Q9NUN5 540 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 GPRC5DQ9NZD1 345 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 MAD2L2Q9UI95 211 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 HACL1Q9UJ83 578 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 CNTNAP1P78357 1384 aa11.12□□□□□ -0.63
PHC1-206ENST00000539063 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 GH2P01242 217 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 MMP1P03956 469 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
PHC1-206ENST00000539063 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 KRT2P35908 639 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 NOVP48745 357 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 PRELPP51888 382 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 NLRP5P59047 1200 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 UBE2HP62256 183 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
PHC1-206ENST00000539063 SEPT2Q15019 361 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 SF3A1Q15459 793 aaKnown RBP11.11□□□□□ -0.63
PHC1-206ENST00000539063 KLHL40Q2TBA0 621 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 FAM177A1Q8N128 213 aaPredicted RBP11.11□□□□□ -0.63
PHC1-206ENST00000539063 PIBF1Q8WXW3 757 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 AIFM3Q96NN9 605 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
PHC1-206ENST00000539063 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 SH3GLB2Q9NR46 395 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 SYNPO2Q9UMS6 1093 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 NOL7Q9UMY1 257 aaKnown RBP11.11□□□□□ -0.63
PHC1-206ENST00000539063 PPP2R3BQ9Y5P8 575 aa11.11□□□□□ -0.63
PHC1-206ENST00000539063 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 hCG_1984214I3L0E3 225 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 ASNSP08243 561 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 GOLGA8HP0CJ92 632 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 PDHBP11177 359 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
PHC1-206ENST00000539063 SLC1A4P43007 532 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 FUT2Q10981 343 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 STK38Q15208 465 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 PFKFB3Q16875 520 aaPredicted RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 DIS3L2Q8IYB7 885 aaKnown RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
PHC1-206ENST00000539063 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
PHC1-206ENST00000539063 ELP1O95163 1332 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
PHC1-206ENST00000539063 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
PHC1-206ENST00000539063 hCG_1642624A0A1W2PR95 340 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 GUCY1A2P33402 732 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 SUPT20HL1Q3ZLR7 823 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
PHC1-206ENST00000539063 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 GALNT17Q6IS24 598 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 FAM173BQ6P4H8 233 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 MIGA2Q7L4E1 593 aa11.09□□□□□ -0.63
PHC1-206ENST00000539063 CLEC10AQ8IUN9 316 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms