RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 AFG3L2Q9Y4W6 797 aa27.53■■■□□ 2
TMEM260-202ENST00000538838 LOC285556D6RIA3 1793 aa27.53■■■□□ 2
TMEM260-202ENST00000538838 PPATQ06203 517 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 APOA5Q6Q788 366 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 ZNF654Q8IZM8 581 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 NAP1L2Q9ULW6 460 aaPredicted RBP27.52■■■□□ 2
TMEM260-202ENST00000538838 GJA5P36382 358 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 MTMR2Q13614 643 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 CHMP4CQ96CF2 233 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 TBC1D2Q9BYX2 928 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 SH2D4AQ9H788 454 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 TPCN1Q9ULQ1 816 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 SLC12A7Q9Y666 1083 aa27.52■■■□□ 2
TMEM260-202ENST00000538838 RAD21O60216 631 aa27.51■■□□□ 1.99
TMEM260-202ENST00000538838 PPIL2Q13356 520 aa27.51■■□□□ 1.99
TMEM260-202ENST00000538838 DGKZQ13574 1117 aa27.51■■□□□ 1.99
TMEM260-202ENST00000538838 IL27Q8NEV9 243 aa27.51■■□□□ 1.99
TMEM260-202ENST00000538838 GOLGA8BA8MQT2 603 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 USP17L10C9JJH3 530 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 IRF6O14896 467 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 RXRAP19793 462 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 CATIPQ7Z7H3 387 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 WNK4Q96J92 1243 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 KIAA1683Q9H0B3 1180 aa27.5■■□□□ 1.99
TMEM260-202ENST00000538838 LARGE1O95461 756 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 APLP1P51693 650 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 EVCP57679 992 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 KIAA1755Q5JYT7 1200 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 MICU3Q86XE3 530 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 SYNPO2Q9UMS6 1093 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 BACE1P56817 501 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 GMCL1P1Q8NEA9 526 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 NUP133Q8WUM0 1156 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 LIMCH1Q9UPQ0 1083 aa27.49■■□□□ 1.99
TMEM260-202ENST00000538838 DDAH1O94760 285 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 ZNF157P51786 506 aaPredicted RBP27.48■■□□□ 1.99
TMEM260-202ENST00000538838 TROAPQ12815 778 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 MKRN3Q13064 507 aaKnown RBP27.48■■□□□ 1.99
TMEM260-202ENST00000538838 RGMBQ6NW40 437 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 RASAL3Q86YV0 1011 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 SPICE1Q8N0Z3 855 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 VCPKMTQ9H867 229 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 GOPCQ9HD26 462 aa27.48■■□□□ 1.99
TMEM260-202ENST00000538838 F5H6K3 240 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 ZBTB43O43298 467 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 NDUFB10O96000 172 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 HMGCS2P54868 508 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 KLRC3Q07444 240 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 STK3Q13188 491 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 SYNE3Q6ZMZ3 975 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 CCDC144CPQ8IYA2 1237 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 HPS5Q9UPZ3 1129 aa27.47■■□□□ 1.99
TMEM260-202ENST00000538838 PDHBP11177 359 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 PDIA3P30101 505 aaKnown RBP27.46■■□□□ 1.99
TMEM260-202ENST00000538838 ME3Q16798 604 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 SPRYD7Q5W111 196 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 SLFN13Q68D06 897 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 CREBZFQ9NS37 354 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 KCNH4Q9UQ05 1017 aa27.46■■□□□ 1.99
TMEM260-202ENST00000538838 MCM2P49736 904 aa27.45■■□□□ 1.99
TMEM260-202ENST00000538838 SNX21Q969T3 373 aa27.45■■□□□ 1.99
TMEM260-202ENST00000538838 ZNF274Q96GC6 653 aaPredicted RBP27.45■■□□□ 1.99
TMEM260-202ENST00000538838 EMILIN3Q9NT22 766 aa27.45■■□□□ 1.99
TMEM260-202ENST00000538838 PARP14Q460N5 1801 aa27.45■■□□□ 1.98
TMEM260-202ENST00000538838 GOLGA8AA7E2F4 631 aa27.45■■□□□ 1.98
TMEM260-202ENST00000538838 USP14P54578 494 aa27.45■■□□□ 1.98
TMEM260-202ENST00000538838 USP17L2Q6R6M4 530 aa27.45■■□□□ 1.98
TMEM260-202ENST00000538838 NUP88Q99567 741 aaPredicted RBP27.45■■□□□ 1.98
TMEM260-202ENST00000538838 RBM19Q9Y4C8 960 aaKnown RBP27.45■■□□□ 1.98
TMEM260-202ENST00000538838 NID2Q14112 1375 aa27.44■■□□□ 1.98
TMEM260-202ENST00000538838 C19orf81C9J6K1 198 aa27.44■■□□□ 1.98
TMEM260-202ENST00000538838 CXCL11O14625 94 aa27.44■■□□□ 1.98
TMEM260-202ENST00000538838 SNHG28P0DPA3 235 aa27.44■■□□□ 1.98
TMEM260-202ENST00000538838 METAP2P50579 478 aaKnown RBP eCLIP27.44■■□□□ 1.98
TMEM260-202ENST00000538838 FRMPD2Q68DX3 1309 aaPredicted RBP27.44■■□□□ 1.98
TMEM260-202ENST00000538838 A0A0G2JLL6 359 aaPredicted RBP27.43■■□□□ 1.98
TMEM260-202ENST00000538838 CALM1P0DP23 149 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 CALM2P0DP24 149 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 CALM3P0DP25 149 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 ZBTB48P10074 688 aaPredicted RBP27.43■■□□□ 1.98
TMEM260-202ENST00000538838 GRM4Q14833 912 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 SH3D19Q5HYK7 790 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 PRRT2Q7Z6L0 340 aaPredicted RBP27.43■■□□□ 1.98
TMEM260-202ENST00000538838 DCAF4Q8WV16 495 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 GMCL1Q96IK5 515 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 HHIPL1Q96JK4 782 aa27.43■■□□□ 1.98
TMEM260-202ENST00000538838 NCOA5Q9HCD5 579 aaKnown RBP27.43■■□□□ 1.98
TMEM260-202ENST00000538838 SLC10A3P09131 477 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 GOLGA8HP0CJ92 632 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 VCAM1P19320 739 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 SLC1A4P43007 532 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 RCAN1P53805 252 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 CCT2P78371 535 aaKnown RBP27.42■■□□□ 1.98
TMEM260-202ENST00000538838 CCDC96Q2M329 555 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 HSCBQ8IWL3 235 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 NECAB1Q8N987 351 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 TMX3Q96JJ7 454 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 C12orf42Q96LP6 360 aa27.42■■□□□ 1.98
TMEM260-202ENST00000538838 ZSCAN31Q96LW9 406 aaPredicted RBP27.42■■□□□ 1.98
TMEM260-202ENST00000538838 SLKQ9H2G2 1235 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms