RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 TXNRD2Q9NNW7 524 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 INCENPQ9NQS7 918 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
CD9-208ENST00000538834 PRDM1O75626 825 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 CNMDO75829 334 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 PRMT2P55345 433 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 ARHGEF10LQ9HCE6 1279 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 DIAPH3Q9NSV4 1193 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
CD9-208ENST00000538834 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
CD9-208ENST00000538834 PSMC4P43686 418 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 ARHGEF6Q15052 776 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 Q3C1V9 767 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 SKAP1Q86WV1 359 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 ZNF444Q8N0Y2 327 aaPredicted RBP16.3■□□□□ 0.2
CD9-208ENST00000538834 ANKRD13CQ8N6S4 541 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
CD9-208ENST00000538834 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
CD9-208ENST00000538834 PLXNA1Q9UIW2 1896 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 MYPNQ86TC9 1320 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 SGSM2O43147 1006 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 SMCR8Q8TEV9 937 aaPredicted RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 STAG1Q8WVM7 1258 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 ARMC5Q96C12 935 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 FEZ1Q99689 392 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 RPAP3Q9H6T3 665 aaPredicted RBP16.29■□□□□ 0.2
CD9-208ENST00000538834 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 RABGAP1Q9Y3P9 1069 aa16.29■□□□□ 0.2
CD9-208ENST00000538834 NT5C2P49902 561 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 IRX3P78415 501 aaPredicted RBP16.28■□□□□ 0.2
CD9-208ENST00000538834 TFAP4Q01664 338 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 COG2Q14746 738 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 KIF22Q14807 665 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 AKNAD1Q5T1N1 836 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 TBC1D10CQ8IV04 446 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
CD9-208ENST00000538834 PEX10O60683 326 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 DSG3P32926 999 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 RGS19P49795 217 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 ERVK-24P63145 666 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 IRF5Q13568 498 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 FAM47AQ5JRC9 791 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
CD9-208ENST00000538834 TNRC18O15417 2968 aaPredicted RBP16.27■□□□□ 0.19
CD9-208ENST00000538834 MYH6P13533 1939 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 F5H6K3 240 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 TTLL1O95922 423 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 FCGRTP55899 365 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 PTH1RQ03431 593 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 KLRC3Q07444 240 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 MAP4K1Q92918 833 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 GABRQQ9UN88 632 aa16.26■□□□□ 0.19
CD9-208ENST00000538834 NDUFB10O96000 172 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 CENPBP07199 599 aaPredicted RBP16.25■□□□□ 0.19
CD9-208ENST00000538834 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 HAND2P61296 217 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 REPS2Q8NFH8 660 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 RUFY2Q8WXA3 655 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 GOPCQ9HD26 462 aa16.25■□□□□ 0.19
CD9-208ENST00000538834 ZNF213O14771 459 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 NMT2O60551 498 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 IGHA2P01877 340 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 HOXD10P28358 340 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 PRKCZQ05513 592 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 PPP4R3BQ5MIZ7 849 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 SPICE1Q8N0Z3 855 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 ANKS1AQ92625 1134 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 PORCNQ9H237 461 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 CTNNA3Q9UI47 895 aa16.24■□□□□ 0.19
CD9-208ENST00000538834 MKI67P46013 3256 aaKnown RBP16.24■□□□□ 0.19
CD9-208ENST00000538834 NEDD4P46934 1319 aa16.23■□□□□ 0.19
CD9-208ENST00000538834 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
CD9-208ENST00000538834 PLA2G6O60733 806 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms