RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 RBL2Q08999 1139 aa13.87□□□□□ -0.19
USP3-203ENST00000538686 LBRQ14739 615 aaKnown RBP13.87□□□□□ -0.19
USP3-203ENST00000538686 HIBCHQ6NVY1 386 aaPredicted RBP13.87□□□□□ -0.19
USP3-203ENST00000538686 Q6ZUG5 572 aa13.87□□□□□ -0.19
USP3-203ENST00000538686 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
USP3-203ENST00000538686 GSPT2Q8IYD1 628 aaKnown RBP13.87□□□□□ -0.19
USP3-203ENST00000538686 CCDC63Q8NA47 563 aa13.87□□□□□ -0.19
USP3-203ENST00000538686 TCEANC2Q96MN5 208 aa13.87□□□□□ -0.19
USP3-203ENST00000538686 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
USP3-203ENST00000538686 CLTCQ00610 1675 aaKnown RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 FMNL1O95466 1100 aaPredicted RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 PPP1R7Q15435 360 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 IFI16Q16666 785 aaKnown RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 CCDC178Q5BJE1 867 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 CFAP58Q5T655 872 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 GKAP1Q5VSY0 366 aaPredicted RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 TRIML1Q8N9V2 468 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 CCT6BQ92526 530 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 SEC16BQ96JE7 1060 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 ATP6V1G3Q96LB4 118 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 TSPAN18Q96SJ8 248 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 HPSEQ9Y251 543 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 ABCC1P33527 1531 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 ZMYM6O95789 1325 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 MAP3K15Q6ZN16 1313 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 OPLAHO14841 1288 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 SGSM1Q2NKQ1 1148 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 TRIM42Q8IWZ5 723 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 CLASRPQ8N2M8 674 aaKnown RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 MREGQ8N565 214 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
USP3-203ENST00000538686 ZIM3Q96PE6 472 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 AGLP35573 1532 aa13.86□□□□□ -0.19
USP3-203ENST00000538686 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 SEMA3EO15041 775 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 KIF4AO95239 1232 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 ECEL1O95672 775 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 MYL1P05976 194 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 PBX1P40424 430 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 SEC24CP53992 1094 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 ZNF268Q14587 947 aaPredicted RBP13.85□□□□□ -0.19
USP3-203ENST00000538686 MAATS1Q7Z4T9 603 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 ACRBPQ8NEB7 543 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
USP3-203ENST00000538686 CACNA1FO60840 1977 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 GPR75-ASB3A0A0A6YYF3 556 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 A0A0U1RQJ8 604 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ZMYND10O75800 440 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ERCC5P28715 1186 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 VAV2P52735 878 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 MXRA7P84157 204 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 NMIQ13287 307 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 PTPN21Q16825 1174 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 CMPK2Q5EBM0 449 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 CACNA2D4Q7Z3S7 1137 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 APBB1IPQ7Z5R6 666 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 CADPS2Q86UW7 1296 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 IQCKQ8N0W5 287 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ANKRD24Q8TF21 1146 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 RRP36Q96EU6 259 aaKnown RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 MMADHCQ9H3L0 296 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 NDST4Q9H3R1 872 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 CWC25Q9NXE8 425 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 WDR35Q9P2L0 1181 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ASB3Q9Y575 518 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 PPP6R2O75170 966 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 PAEPP09466 180 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ALDH1B1P30837 517 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 ITGB3BPQ13352 177 aaPredicted RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 ANO1Q5XXA6 986 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 PPP1R42Q7Z4L9 355 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 LMNTD2Q8IXW0 634 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 SH2D3CQ8N5H7 860 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
USP3-203ENST00000538686 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 LEMD3Q9Y2U8 911 aa13.84□□□□□ -0.19
USP3-203ENST00000538686 MROH1Q8NDA8 1641 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 DIAPH2O60879 1101 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 PAK2Q13177 524 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 G2E3Q7L622 706 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 LZTS2Q9BRK4 669 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 MAP2P11137 1827 aaKnown RBP13.83□□□□□ -0.2
USP3-203ENST00000538686 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.2
USP3-203ENST00000538686 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.2
USP3-203ENST00000538686 IFIT3O14879 490 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms