RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CDC25AP30304 524 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 MECOMQ03112 1051 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 RBL2Q08999 1139 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 SH3RF1Q7Z6J0 888 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 FCHSD1Q86WN1 690 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 PPP1R3GB7ZBB8 358 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
CPNE8-203ENST00000538596 PRDX5P30044 214 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 IL17AQ16552 155 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 ZNF771Q7L3S4 317 aaPredicted RBP13.61□□□□□ -0.23
CPNE8-203ENST00000538596 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
CPNE8-203ENST00000538596 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
CPNE8-203ENST00000538596 FHOD1Q9Y613 1164 aa13.61□□□□□ -0.23
CPNE8-203ENST00000538596 SEC31AO94979 1220 aaKnown RBP13.6□□□□□ -0.23
CPNE8-203ENST00000538596 CASQ1P31415 396 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 MCM7P33993 719 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 SPATA1Q5VX52 437 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 SPATA31A1Q5TZJ5 1347 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 COL22A1Q8NFW1 1626 aaPredicted RBP13.6□□□□□ -0.23
CPNE8-203ENST00000538596 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
CPNE8-203ENST00000538596 CCT6AP40227 531 aaKnown RBP13.6□□□□□ -0.23
CPNE8-203ENST00000538596 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 MTRQ99707 1265 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 DCP1AQ9NPI6 582 aaPredicted RBP13.6□□□□□ -0.23
CPNE8-203ENST00000538596 CTNND2Q9UQB3 1225 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 XDHP47989 1333 aa13.6□□□□□ -0.23
CPNE8-203ENST00000538596 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
CPNE8-203ENST00000538596 PPP2R5BQ15173 497 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 LINC00116Q8NCU8 138 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 KIFC2Q96AC6 838 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
CPNE8-203ENST00000538596 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
CPNE8-203ENST00000538596 C8orf37Q96NL8 207 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 ZNF652Q9Y2D9 606 aa13.59□□□□□ -0.23
CPNE8-203ENST00000538596 FGRP09769 529 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 NLRP5P59047 1200 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 CDKAL1Q5VV42 579 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 TBC1D9BQ66K14 1250 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 CTCFLQ8NI51 663 aaPredicted RBP13.58□□□□□ -0.23
CPNE8-203ENST00000538596 RASGRP4Q8TDF6 673 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 FERMT2Q96AC1 680 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.23
CPNE8-203ENST00000538596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.58□□□□□ -0.23
CPNE8-203ENST00000538596 PNMA6AP0CW24 399 aaPredicted RBP13.58□□□□□ -0.24
CPNE8-203ENST00000538596 CASP14P31944 242 aa13.58□□□□□ -0.24
CPNE8-203ENST00000538596 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
CPNE8-203ENST00000538596 ATP2C1P98194 919 aaPredicted RBP13.58□□□□□ -0.24
CPNE8-203ENST00000538596 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
CPNE8-203ENST00000538596 SF3B3Q15393 1217 aaKnown RBP13.58□□□□□ -0.24
CPNE8-203ENST00000538596 TERF2Q15554 542 aa13.58□□□□□ -0.24
CPNE8-203ENST00000538596 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
CPNE8-203ENST00000538596 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
CPNE8-203ENST00000538596 E2F4Q16254 413 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 GSDMAQ96QA5 445 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 A0A1B0GUL6 1792 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 LAMB2P55268 1798 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 EFCAB8A8MWE9 144 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
CPNE8-203ENST00000538596 DDAH1O94760 285 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 ABL1P00519 1130 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 SCG2P13521 617 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 PBX1P40424 430 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
CPNE8-203ENST00000538596 RRAGBQ5VZM2 374 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 CCDC12Q8WUD4 166 aaPredicted RBP13.57□□□□□ -0.24
CPNE8-203ENST00000538596 FAM205AQ6ZU69 1335 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 TSPY2A6NKD2 308 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 CALM1P0DP23 149 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 CALM2P0DP24 149 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 CALM3P0DP25 149 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 PLA2G4AP47712 749 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
CPNE8-203ENST00000538596 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
CPNE8-203ENST00000538596 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
CPNE8-203ENST00000538596 TFRCP02786 760 aaKnown RBP13.56□□□□□ -0.24
CPNE8-203ENST00000538596 GYPCP04921 128 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 PANX2Q96RD6 677 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 SRRTQ9BXP5 876 aaKnown RBP13.56□□□□□ -0.24
CPNE8-203ENST00000538596 VPS16Q9H269 839 aa13.56□□□□□ -0.24
CPNE8-203ENST00000538596 ADGRG1Q9Y653 693 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms