RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CALCRLQ16602 461 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 DYMQ7RTS9 669 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 APPBP2Q92624 585 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 SYCP2Q9BX26 1530 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 RGS16O15492 202 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 OPHN1O60890 802 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 HIP1RO75146 1068 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 CABP7Q86V35 215 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 IFIH1Q9BYX4 1025 aaKnown RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 MRPL44Q9H9J2 332 aaKnown RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 PICK1Q9NRD5 415 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 TBC1D7Q9P0N9 293 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 ZNF513Q8N8E2 541 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 EYA2O00167 538 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 NOP56O00567 594 aaKnown RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 PPP2R5BQ15173 497 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 RASIP1Q5U651 963 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 ANKRD42Q8N9B4 389 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 XAB2Q9HCS7 855 aaKnown RBP10.97□□□□□ -0.65
COL4A6-208ENST00000538570 POLKQ9UBT6 870 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 AMFRQ9UKV5 643 aa10.97□□□□□ -0.65
COL4A6-208ENST00000538570 GNA14O95837 355 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 STAG1Q8WVM7 1258 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 HVCN1Q96D96 273 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 CCDC51Q96ER9 411 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 SUFUQ9UMX1 484 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 KDM2BQ8NHM5 1336 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 ECM2O94769 699 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 ZFYVE9O95405 1425 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 MYCLP12524 364 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 BRD3Q15059 726 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 PPP4R1Q8TF05 950 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 PARD3Q8TEW0 1356 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 GOLGA8KD6RF30 607 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 HIBADHP31937 336 aaKnown RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 BRDTQ58F21 947 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 ICE2Q659A1 982 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 UIMC1Q96RL1 719 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 DDX41Q9UJV9 622 aaKnown RBP10.96□□□□□ -0.65
COL4A6-208ENST00000538570 SAR1BQ9Y6B6 198 aa10.96□□□□□ -0.65
COL4A6-208ENST00000538570 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.66
COL4A6-208ENST00000538570 GPAA1O43292 621 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 CTNNA1P35221 906 aaKnown RBP10.96□□□□□ -0.66
COL4A6-208ENST00000538570 PHLDB3Q6NSJ2 640 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 RRAGAQ7L523 313 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 NELFCDQ8IXH7 590 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 SH3GL3Q99963 347 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 RNMTO43148 476 aaKnown RBP10.96□□□□□ -0.66
COL4A6-208ENST00000538570 ITGA6P23229 1130 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 PSMD2Q13200 908 aa10.96□□□□□ -0.66
COL4A6-208ENST00000538570 CD19P15391 556 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PHBP35232 272 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 KRT24Q2M2I5 525 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 RSPH3Q86UC2 560 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PALM2Q8IXS6 379 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 EFCAB13Q8IY85 973 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 NOD1Q9Y239 953 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-208ENST00000538570 TIMM10P62072 90 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 RSAD2Q8WXG1 361 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 SEPT8Q92599 483 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 XAGE2Q96GT9 111 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 KRT12Q99456 494 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 KLHL14Q9P2G3 628 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 MGEA5O60502 916 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PRPF6O94906 941 aaKnown RBP10.95□□□□□ -0.66
COL4A6-208ENST00000538570 KRT19P08727 400 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 ATICP31939 592 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 NACA2Q9H009 215 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 MAST3O60307 1309 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PPFIA2O75334 1257 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 YWHAEP62258 255 aaKnown RBP10.95□□□□□ -0.66
COL4A6-208ENST00000538570 RPS6KA2Q15349 733 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 UFL1O94874 794 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 FAM173BQ6P4H8 233 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 RASEFQ8IZ41 740 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 TRIM58Q8NG06 486 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 CXorf38Q8TB03 319 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 BCAS4Q8TDM0 211 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 GRK7Q8WTQ7 553 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
COL4A6-208ENST00000538570 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 CAPS2Q9BXY5 557 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PCDH11XQ9BZA7 1347 aa10.95□□□□□ -0.66
COL4A6-208ENST00000538570 PCDH11YQ9BZA8 1340 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms